RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 TTC39AQ5SRH9 613 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 CDC42EP5Q6NZY7 148 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 MIGA2Q7L4E1 593 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 UBE2Q1Q7Z7E8 422 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 ZSCAN29Q8IWY8 852 aaPredicted RBP10.21□□□□□ -0.77
TPM4-211ENST00000589897 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 SPATA5Q8NB90 893 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 FAM151AQ8WW52 585 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 ZNF341Q9BYN7 854 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 RNF208Q9H0X6 261 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 ZCCHC17Q9NP64 241 aaKnown RBP10.21□□□□□ -0.77
TPM4-211ENST00000589897 RAI14Q9P0K7 980 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 BIN2Q9UBW5 565 aaPredicted RBP10.21□□□□□ -0.77
TPM4-211ENST00000589897 STAP2Q9UGK3 403 aa10.21□□□□□ -0.77
TPM4-211ENST00000589897 LDHCP07864 332 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 GRK4P32298 578 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 GJA5P36382 358 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 MTFR1Q15390 333 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 PDS5AQ29RF7 1337 aaKnown RBP10.2□□□□□ -0.78
TPM4-211ENST00000589897 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.2□□□□□ -0.78
TPM4-211ENST00000589897 ERO1BQ86YB8 467 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.2□□□□□ -0.78
TPM4-211ENST00000589897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.2□□□□□ -0.78
TPM4-211ENST00000589897 RAET1EQ8TD07 263 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 SHISA4Q96DD7 197 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 NOL10Q9BSC4 688 aaKnown RBP10.2□□□□□ -0.78
TPM4-211ENST00000589897 PRDM6Q9NQX0 595 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 LRP2BPQ9P2M1 347 aa10.2□□□□□ -0.78
TPM4-211ENST00000589897 OTOFQ9HC10 1997 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 A0A0C4DFX4 3053 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 RPAP1Q9BWH6 1393 aaPredicted RBP10.19□□□□□ -0.78
TPM4-211ENST00000589897 CCL15-CCL14A0A0B4J2E2 113 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 FARP2O94887 1054 aaPredicted RBP10.19□□□□□ -0.78
TPM4-211ENST00000589897 RLBP1P12271 317 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 CCL5P13501 91 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 POLA2Q14181 598 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 CCL15Q16663 113 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 LRIT3Q3SXY7 679 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 TNNI3KQ59H18 835 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 PANK1Q8TE04 598 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 SSH3Q8TE77 659 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 BRI3BPQ8WY22 251 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 ZKSCAN4Q969J2 545 aaPredicted RBP10.19□□□□□ -0.78
TPM4-211ENST00000589897 GPR108Q9NPR9 543 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 MTMR10Q9NXD2 777 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 HMG20BQ9P0W2 317 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 SRRDQ9UH36 339 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 FPGT-TNNI3KV9GXZ4 949 aa10.19□□□□□ -0.78
TPM4-211ENST00000589897 SZT2Q5T011 3432 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 MROH7-TTC4A0A0A0MT08 1334 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 ZBTB22O15209 634 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 CETPP11597 493 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 ARID4AP29374 1257 aaPredicted RBP10.18□□□□□ -0.78
TPM4-211ENST00000589897 BTDP43251 543 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 RGS3P49796 1198 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 MECOMQ03112 1051 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 NFIAQ12857 509 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 SNAPC2Q13487 334 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 PICALMQ13492 652 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 ERC1Q8IUD2 1116 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 U2AF1L4Q8WU68 220 aaKnown RBP10.18□□□□□ -0.78
TPM4-211ENST00000589897 CNKSR2Q8WXI2 1034 aa10.18□□□□□ -0.78
TPM4-211ENST00000589897 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
TPM4-211ENST00000589897 RBBP6Q7Z6E9 1792 aaKnown RBP10.18□□□□□ -0.78
TPM4-211ENST00000589897 GAKO14976 1311 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 SPDYE5A6NIY4 337 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 ENTPD3O75355 529 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 FMNL1O95466 1100 aaPredicted RBP10.17□□□□□ -0.78
TPM4-211ENST00000589897 SGPL1O95470 568 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 TFRCP02786 760 aaKnown RBP10.17□□□□□ -0.78
TPM4-211ENST00000589897 PSMC4P43686 418 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 HSP90AB4PQ58FF6 505 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 PI16Q6UXB8 463 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 FAM43AQ8N2R8 423 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.17□□□□□ -0.78
TPM4-211ENST00000589897 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
TPM4-211ENST00000589897 GDF15Q99988 308 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 IDI2Q9BXS1 227 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 PICK1Q9NRD5 415 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 SNRKQ9NRH2 765 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 FAM198AQ9UFP1 575 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 SNCAIPQ9Y6H5 919 aa10.17□□□□□ -0.78
TPM4-211ENST00000589897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.17□□□□□ -0.78
TPM4-211ENST00000589897 HTTP42858 3142 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 CENPFP49454 3210 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 HMMRO75330 724 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 BAG3O95817 575 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 MAP4K4O95819 1239 aaPredicted RBP10.16□□□□□ -0.78
TPM4-211ENST00000589897 INPP5BP32019 993 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 MCAMP43121 646 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 PPATQ06203 517 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 PPIL2Q13356 520 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 CEP85Q6P2H3 762 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 DBNDD2Q9BQY9 259 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 ARHGAP39Q9C0H5 1083 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 CCDC8Q9H0W5 538 aaPredicted RBP10.16□□□□□ -0.78
TPM4-211ENST00000589897 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
TPM4-211ENST00000589897 DDX19BQ9UMR2 479 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms