RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 CAGE1Q8TC20 777 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 PRDM10Q9NQV6 1147 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 RICTORQ6R327 1708 aa16.68■□□□□ 0.26
RETREG3-208ENST00000589797 N4BP3O15049 544 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 CELF1Q92879 486 aaKnown RBP16.67■□□□□ 0.26
RETREG3-208ENST00000589797 SCNN1DP51172 638 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 NDUFA8P51970 172 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 CCDC178Q5BJE1 867 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 NUP88Q99567 741 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-208ENST00000589797 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 KRT2P35908 639 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 TNNI2P48788 182 aa16.67■□□□□ 0.26
RETREG3-208ENST00000589797 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
RETREG3-208ENST00000589797 PXDNQ92626 1479 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 CBX1P83916 185 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 PNOCQ13519 176 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 SLF2Q8IX21 1173 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.66■□□□□ 0.26
RETREG3-208ENST00000589797 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 NR5A1Q13285 461 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 MFSD14BQ5SR56 506 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 FANCBQ8NB91 859 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 ZNHIT6Q9NWK9 470 aaKnown RBP16.66■□□□□ 0.26
RETREG3-208ENST00000589797 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 GGA1Q9UJY5 639 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 COBLO75128 1261 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 GSTO1P78417 241 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 KIF18AQ8NI77 898 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
RETREG3-208ENST00000589797 DEXIO95424 95 aa16.65■□□□□ 0.26
RETREG3-208ENST00000589797 STAT6P42226 847 aa16.65■□□□□ 0.26
RETREG3-208ENST00000589797 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
RETREG3-208ENST00000589797 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
RETREG3-208ENST00000589797 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
RETREG3-208ENST00000589797 JAKMIP3Q5VZ66 844 aa16.65■□□□□ 0.26
RETREG3-208ENST00000589797 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.26
RETREG3-208ENST00000589797 HLA-DOAP06340 250 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 GPKOWQ92917 476 aaPredicted RBP eCLIP16.64■□□□□ 0.25
RETREG3-208ENST00000589797 PRDX5P30044 214 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 CDC25AP30304 524 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 APBA3O96018 575 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 PFKFB1P16118 471 aa16.64■□□□□ 0.25
RETREG3-208ENST00000589797 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 STRBPQ96SI9 672 aaKnown RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 FEZ1Q99689 392 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 CCT6AP40227 531 aaKnown RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 MTIF2P46199 727 aaKnown RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 DNAI1Q9UI46 699 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 UBXN4Q92575 508 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 TRIM47Q96LD4 638 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 BLZF1Q9H2G9 400 aa16.63■□□□□ 0.25
RETREG3-208ENST00000589797 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
RETREG3-208ENST00000589797 GNG11P61952 73 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 SNW1Q13573 536 aaKnown RBP16.62■□□□□ 0.25
RETREG3-208ENST00000589797 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
RETREG3-208ENST00000589797 RASGRP4Q8TDF6 673 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 DYNLL2Q96FJ2 89 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 CEP89Q96ST8 783 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 USP17L8P0C7I0 530 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 CEP135Q66GS9 1140 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 KIAA0825Q8IV33 1275 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 CYB5R4Q7L1T6 521 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 RIPOR2Q9Y4F9 1068 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 MEGF6O75095 1541 aa16.62■□□□□ 0.25
RETREG3-208ENST00000589797 KIF4BQ2VIQ3 1234 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 ERVV-1B6SEH8 477 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 CAVIN2O95810 425 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 ASIC1P78348 528 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 TEX35Q5T0J7 233 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 SERTAD1Q9UHV2 236 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 ADALQ6DHV7 355 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 GOLGA6L1Q8N7Z2 621 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 CPVLQ9H3G5 476 aa16.61■□□□□ 0.25
RETREG3-208ENST00000589797 ARGLU1Q9NWB6 273 aaPredicted RBP16.61■□□□□ 0.25
RETREG3-208ENST00000589797 CYP2D6P10635 497 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 KIAA1328Q86T90 577 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 GRAMD1CQ8IYS0 662 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 WDR66Q8TBY9 1149 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 ZNF75DP51815 510 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 KARSQ15046 597 aaKnown RBP16.6■□□□□ 0.25
RETREG3-208ENST00000589797 PGBD1Q96JS3 809 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 ZSCAN10Q96SZ4 725 aaPredicted RBP16.6■□□□□ 0.25
RETREG3-208ENST00000589797 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 ELP1O95163 1332 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms