RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
ERCC1-208ENST00000589165 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
ERCC1-208ENST00000589165 MYO5AQ9Y4I1 1855 aaKnown RBP16.89■□□□□ 0.29
ERCC1-208ENST00000589165 TESPA1A2RU30 521 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-208ENST00000589165 IDH1O75874 414 aaKnown RBP16.89■□□□□ 0.29
ERCC1-208ENST00000589165 PICALMQ13492 652 aa16.89■□□□□ 0.29
ERCC1-208ENST00000589165 TTF1Q15361 905 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-208ENST00000589165 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
ERCC1-208ENST00000589165 ZKSCAN4Q969J2 545 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-208ENST00000589165 CFHR5Q9BXR6 569 aa16.89■□□□□ 0.29
ERCC1-208ENST00000589165 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
ERCC1-208ENST00000589165 SNCAIPQ9Y6H5 919 aa16.89■□□□□ 0.29
ERCC1-208ENST00000589165 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
ERCC1-208ENST00000589165 DDTLA6NHG4 134 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-208ENST00000589165 SPDYE5A6NIY4 337 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 ATP5JP18859 108 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 MAP3K12Q12852 859 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 ZSCAN29Q8IWY8 852 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-208ENST00000589165 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 CRBNQ96SW2 442 aa16.88■□□□□ 0.29
ERCC1-208ENST00000589165 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
ERCC1-208ENST00000589165 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-208ENST00000589165 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
ERCC1-208ENST00000589165 AAMPQ13685 434 aa16.87■□□□□ 0.29
ERCC1-208ENST00000589165 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
ERCC1-208ENST00000589165 ERO1BQ86YB8 467 aa16.87■□□□□ 0.29
ERCC1-208ENST00000589165 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
ERCC1-208ENST00000589165 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-208ENST00000589165 MS4A4AQ96JQ5 239 aa16.87■□□□□ 0.29
ERCC1-208ENST00000589165 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-208ENST00000589165 PHF20L1A8MW92 1017 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 TBC1D12O60347 775 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 CYP7A1P22680 504 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 INPP5BP32019 993 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 NOM1Q5C9Z4 860 aaKnown RBP16.86■□□□□ 0.29
ERCC1-208ENST00000589165 NOL9Q5SY16 702 aaKnown RBP16.86■□□□□ 0.29
ERCC1-208ENST00000589165 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-208ENST00000589165 GTF2A2P52657 109 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 PPATQ06203 517 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
ERCC1-208ENST00000589165 OTOFQ9HC10 1997 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 MAST2Q6P0Q8 1798 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
ERCC1-208ENST00000589165 GOLIM4O00461 696 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 PPIL2Q13356 520 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 OTUD7BQ6GQQ9 843 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
ERCC1-208ENST00000589165 HAUS7Q99871 368 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 BCL11AQ9H165 835 aa16.85■□□□□ 0.29
ERCC1-208ENST00000589165 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
ERCC1-208ENST00000589165 IRF6O14896 467 aa16.84■□□□□ 0.29
ERCC1-208ENST00000589165 TBC1D8O95759 1140 aa16.84■□□□□ 0.29
ERCC1-208ENST00000589165 BRI3BPQ8WY22 251 aa16.84■□□□□ 0.29
ERCC1-208ENST00000589165 PTPN18Q99952 460 aa16.84■□□□□ 0.29
ERCC1-208ENST00000589165 BOLA2Q9H3K6 86 aa16.84■□□□□ 0.29
ERCC1-208ENST00000589165 ECHDC1Q9NTX5 307 aa16.84■□□□□ 0.29
ERCC1-208ENST00000589165 PDE6AP16499 860 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-208ENST00000589165 SLC9C2Q5TAH2 1124 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 FLT1P17948 1338 aa16.83■□□□□ 0.28
ERCC1-208ENST00000589165 CCL15-CCL14A0A0B4J2E2 113 aa16.82■□□□□ 0.28
ERCC1-208ENST00000589165 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
ERCC1-208ENST00000589165 CETPP11597 493 aa16.82■□□□□ 0.28
ERCC1-208ENST00000589165 DYNLL1P63167 89 aaKnown RBP16.82■□□□□ 0.28
ERCC1-208ENST00000589165 SNAPC2Q13487 334 aa16.82■□□□□ 0.28
ERCC1-208ENST00000589165 CCL15Q16663 113 aa16.82■□□□□ 0.28
ERCC1-208ENST00000589165 MIGA1Q8NAN2 632 aa16.82■□□□□ 0.28
ERCC1-208ENST00000589165 RIOK1Q9BRS2 568 aaKnown RBP16.82■□□□□ 0.28
ERCC1-208ENST00000589165 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
ERCC1-208ENST00000589165 KCNH4Q9UQ05 1017 aa16.82■□□□□ 0.28
ERCC1-208ENST00000589165 LAMB1P07942 1786 aa16.81■□□□□ 0.28
ERCC1-208ENST00000589165 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
ERCC1-208ENST00000589165 GPR25O00155 361 aa16.81■□□□□ 0.28
ERCC1-208ENST00000589165 METTL16Q86W50 562 aaKnown RBP16.81■□□□□ 0.28
ERCC1-208ENST00000589165 MAPKAPK5Q8IW41 473 aa16.81■□□□□ 0.28
ERCC1-208ENST00000589165 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
ERCC1-208ENST00000589165 GPATCH3Q96I76 525 aa16.81■□□□□ 0.28
ERCC1-208ENST00000589165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.81■□□□□ 0.28
ERCC1-208ENST00000589165 DOCK2Q92608 1830 aa16.81■□□□□ 0.28
ERCC1-208ENST00000589165 SLURP2P0DP57 97 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.28
ERCC1-208ENST00000589165 R3HDMLQ9H3Y0 253 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 ZCCHC17Q9NP64 241 aaKnown RBP16.8■□□□□ 0.28
ERCC1-208ENST00000589165 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 ZNF532Q9HCE3 1301 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 MAGEB6P1A0A0J9YX57 407 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 CXCL11O14625 94 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 PTPRAP18433 802 aa16.8■□□□□ 0.28
ERCC1-208ENST00000589165 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-208ENST00000589165 ZNF296Q8WUU4 475 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-208ENST00000589165 ADD2P35612 726 aa16.79■□□□□ 0.28
ERCC1-208ENST00000589165 GCC1Q96CN9 775 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms