RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 VGLL4Q14135 290 aa17.15■□□□□ 0.34
CLPTM1-210ENST00000589158 ADGRA1Q86SQ6 560 aa17.15■□□□□ 0.34
CLPTM1-210ENST00000589158 BOLA2Q9H3K6 86 aa17.15■□□□□ 0.34
CLPTM1-210ENST00000589158 PRDM10Q9NQV6 1147 aa17.15■□□□□ 0.34
CLPTM1-210ENST00000589158 RNF186Q9NXI6 227 aa17.15■□□□□ 0.34
CLPTM1-210ENST00000589158 PLCG2P16885 1265 aa17.14■□□□□ 0.33
CLPTM1-210ENST00000589158 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
CLPTM1-210ENST00000589158 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
CLPTM1-210ENST00000589158 OPTNQ96CV9 577 aa17.14■□□□□ 0.33
CLPTM1-210ENST00000589158 RFX7Q2KHR2 1363 aa17.14■□□□□ 0.33
CLPTM1-210ENST00000589158 DDTLA6NHG4 134 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 MANSC4A6NHS7 340 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 TM4SF4P48230 202 aa17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 PPP4CP60510 307 aa17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 DYNLL1P63167 89 aaKnown RBP17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 MIGA1Q8NAN2 632 aa17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 PAG1Q9NWQ8 432 aa17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 SAGE1Q9NXZ1 904 aa17.13■□□□□ 0.33
CLPTM1-210ENST00000589158 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 INPP5BP32019 993 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 GJA5P36382 358 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 AAMPQ13685 434 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 SLC9C2Q5TAH2 1124 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 GPATCH3Q96I76 525 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 OSBPL5Q9H0X9 879 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 SNCAIPQ9Y6H5 919 aa17.12■□□□□ 0.33
CLPTM1-210ENST00000589158 INHBEP58166 350 aa17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 TMED8Q6PL24 325 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 MAPKAPK5Q8IW41 473 aa17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 HAUS7Q99871 368 aa17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 ZNF112Q9UJU3 913 aa17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
CLPTM1-210ENST00000589158 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
CLPTM1-210ENST00000589158 PDE6AP16499 860 aa17.1■□□□□ 0.33
CLPTM1-210ENST00000589158 ERO1BQ86YB8 467 aa17.1■□□□□ 0.33
CLPTM1-210ENST00000589158 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
CLPTM1-210ENST00000589158 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 TBC1D8O95759 1140 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 TSHZ3Q63HK5 1081 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 ZNF532Q9HCE3 1301 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 ATRNL1Q5VV63 1379 aa17.09■□□□□ 0.33
CLPTM1-210ENST00000589158 MAST2Q6P0Q8 1798 aa17.08■□□□□ 0.33
CLPTM1-210ENST00000589158 FLT1P17948 1338 aa17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 USP5P45974 858 aa17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 GTF2A2P52657 109 aa17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 IFNL1Q8IU54 200 aa17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 RWDD1Q9H446 243 aaPredicted RBP17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
CLPTM1-210ENST00000589158 CCL15-CCL14A0A0B4J2E2 113 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 FAM196BA6NMK8 535 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 PHF20L1A8MW92 1017 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 ALDH1A1P00352 501 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 PPATQ06203 517 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 CCL15Q16663 113 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 OTUD7BQ6GQQ9 843 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
CLPTM1-210ENST00000589158 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 TBC1D12O60347 775 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 IRX6P78412 446 aaPredicted RBP17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 PPIL2Q13356 520 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 NOL9Q5SY16 702 aaKnown RBP17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 SCYL3Q8IZE3 742 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 RIOK1Q9BRS2 568 aaKnown RBP17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 TRIM34Q9BYJ4 488 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 PI4KBQ9UBF8 816 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
CLPTM1-210ENST00000589158 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 TCRBV5S4A2TA0A5A2 114 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 TESPA1A2RU30 521 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 IRF6O14896 467 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 HLA-DOAP06340 250 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 CETPP11597 493 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 ADD2P35612 726 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 SLC4A8Q2Y0W8 1093 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 ZSCAN25Q6NSZ9 544 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 OTUD7AQ8TE49 926 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 PTPN18Q99952 460 aa17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
CLPTM1-210ENST00000589158 TTC41PQ6P2S7 1318 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms