RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
VMP1-209ENST00000588915 MAP4K4O95819 1239 aaPredicted RBP17.35■□□□□ 0.37
VMP1-209ENST00000588915 PRRT2Q7Z6L0 340 aaPredicted RBP17.35■□□□□ 0.37
VMP1-209ENST00000588915 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
VMP1-209ENST00000588915 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
VMP1-209ENST00000588915 GJB1P08034 283 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 GNAI3P08754 354 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 PTPRAP18433 802 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 FCGRTP55899 365 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 UBXN2AP68543 259 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 MTX1Q13505 466 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 MYPNQ86TC9 1320 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 DZIP1Q86YF9 867 aaKnown RBP17.34■□□□□ 0.37
VMP1-209ENST00000588915 AFG3L2Q9Y4W6 797 aa17.34■□□□□ 0.37
VMP1-209ENST00000588915 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 TBC1D12O60347 775 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 MYCP01106 439 aaPredicted RBP17.33■□□□□ 0.36
VMP1-209ENST00000588915 ADORA1P30542 326 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 TIMM10P62072 90 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 RASGRF1Q13972 1273 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
VMP1-209ENST00000588915 MTFR1Q15390 333 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
VMP1-209ENST00000588915 MYH2Q9UKX2 1941 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 GPR75-ASB3A0A0A6YYF3 556 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 GJA8P48165 433 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 FXR1P51114 621 aaKnown RBP eCLIP17.32■□□□□ 0.36
VMP1-209ENST00000588915 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 ZSCAN29Q8IWY8 852 aaPredicted RBP17.32■□□□□ 0.36
VMP1-209ENST00000588915 SLAIN1Q8ND83 568 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 XAGE2Q96GT9 111 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 MEIS3Q99687 375 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 ZSWIM8A7E2V4 1837 aa17.32■□□□□ 0.36
VMP1-209ENST00000588915 MROH7-TTC4A0A0A0MT08 1334 aa17.31■□□□□ 0.36
VMP1-209ENST00000588915 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
VMP1-209ENST00000588915 LDHCP07864 332 aa17.31■□□□□ 0.36
VMP1-209ENST00000588915 CYP2C8P10632 490 aa17.31■□□□□ 0.36
VMP1-209ENST00000588915 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
VMP1-209ENST00000588915 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
VMP1-209ENST00000588915 SHISA4Q96DD7 197 aa17.31■□□□□ 0.36
VMP1-209ENST00000588915 COLQQ9Y215 455 aaPredicted RBP17.31■□□□□ 0.36
VMP1-209ENST00000588915 SRGAP3O43295 1099 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 CCL5P13501 91 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 BTDP43251 543 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 GSTO1P78417 241 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 PRKCZQ05513 592 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 UBE2Q1Q7Z7E8 422 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 PXYLP1Q8TE99 480 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 HTATIP2Q9BUP3 242 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 DDX4Q9NQI0 724 aaKnown RBP17.3■□□□□ 0.36
VMP1-209ENST00000588915 BIN2Q9UBW5 565 aaPredicted RBP17.3■□□□□ 0.36
VMP1-209ENST00000588915 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
VMP1-209ENST00000588915 H0YGN5 161 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
VMP1-209ENST00000588915 RHBDL3P58872 404 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 MECOMQ03112 1051 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 TFCP2Q12800 502 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 IRF5Q13568 498 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 GADL1Q6ZQY3 521 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 RNF208Q9H0X6 261 aa17.29■□□□□ 0.36
VMP1-209ENST00000588915 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
VMP1-209ENST00000588915 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
VMP1-209ENST00000588915 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
VMP1-209ENST00000588915 CEP290O15078 2479 aa17.28■□□□□ 0.36
VMP1-209ENST00000588915 COL2A1P02458 1487 aaPredicted RBP17.27■□□□□ 0.36
VMP1-209ENST00000588915 FLT3LGP49771 235 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 PICALMQ13492 652 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 SPATA5Q8NB90 893 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 PROCA1Q8NCQ7 364 aaPredicted RBP17.27■□□□□ 0.36
VMP1-209ENST00000588915 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.36
VMP1-209ENST00000588915 DPF3Q92784 378 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
VMP1-209ENST00000588915 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 HMG20BQ9P0W2 317 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 PNMA3Q9UL41 463 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 AGTPBP1Q9UPW5 1226 aa17.27■□□□□ 0.36
VMP1-209ENST00000588915 ADCY3O60266 1144 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 IGSF3O75054 1194 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 SGPL1O95470 568 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 ARID4AP29374 1257 aaPredicted RBP17.26■□□□□ 0.35
VMP1-209ENST00000588915 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 COA7Q96BR5 231 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.26■□□□□ 0.35
VMP1-209ENST00000588915 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 NR2E3Q9Y5X4 410 aa17.26■□□□□ 0.35
VMP1-209ENST00000588915 MGAMO43451 1857 aa17.25■□□□□ 0.35
VMP1-209ENST00000588915 TRIM75PA6NK02 468 aa17.25■□□□□ 0.35
VMP1-209ENST00000588915 TNPO2O14787 897 aaKnown RBP17.25■□□□□ 0.35
VMP1-209ENST00000588915 GNAI2P04899 355 aa17.25■□□□□ 0.35
VMP1-209ENST00000588915 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
VMP1-209ENST00000588915 GCLCP48506 637 aaPredicted RBP17.25■□□□□ 0.35
VMP1-209ENST00000588915 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.35
VMP1-209ENST00000588915 FAM110CQ1W6H9 321 aa17.25■□□□□ 0.35
VMP1-209ENST00000588915 HERC5Q9UII4 1024 aaKnown RBP17.25■□□□□ 0.35
VMP1-209ENST00000588915 DOCK1Q14185 1865 aa17.24■□□□□ 0.35
VMP1-209ENST00000588915 PTPRFP10586 1907 aa17.24■□□□□ 0.35
VMP1-209ENST00000588915 CAP2P40123 477 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms