RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 MIGA2Q7L4E1 593 aa18.88■□□□□ 0.61
GCDH-208ENST00000588905 ZFPM1Q8IX07 1006 aa18.88■□□□□ 0.61
GCDH-208ENST00000588905 ZNF296Q8WUU4 475 aaPredicted RBP18.88■□□□□ 0.61
GCDH-208ENST00000588905 ZNF341Q9BYN7 854 aa18.88■□□□□ 0.61
GCDH-208ENST00000588905 PIH1D3Q9NQM4 214 aaKnown RBP18.88■□□□□ 0.61
GCDH-208ENST00000588905 GJA5P36382 358 aa18.87■□□□□ 0.61
GCDH-208ENST00000588905 NAA16Q6N069 864 aaPredicted RBP18.87■□□□□ 0.61
GCDH-208ENST00000588905 CTU1Q7Z7A3 348 aaKnown RBP18.87■□□□□ 0.61
GCDH-208ENST00000588905 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
GCDH-208ENST00000588905 OPTNQ96CV9 577 aa18.87■□□□□ 0.61
GCDH-208ENST00000588905 WRNIP1Q96S55 665 aa18.87■□□□□ 0.61
GCDH-208ENST00000588905 NDUFB9Q9Y6M9 179 aa18.87■□□□□ 0.61
GCDH-208ENST00000588905 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
GCDH-208ENST00000588905 NOL10Q9BSC4 688 aaKnown RBP18.86■□□□□ 0.61
GCDH-208ENST00000588905 DDX4Q9NQI0 724 aaKnown RBP18.86■□□□□ 0.61
GCDH-208ENST00000588905 MYH2Q9UKX2 1941 aa18.86■□□□□ 0.61
GCDH-208ENST00000588905 RFX7Q2KHR2 1363 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 BAG3O95817 575 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 SOX10P56693 466 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 PICALMQ13492 652 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 AAMPQ13685 434 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 ZSCAN29Q8IWY8 852 aaPredicted RBP18.85■□□□□ 0.61
GCDH-208ENST00000588905 CFHR5Q9BXR6 569 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 ZNF112Q9UJU3 913 aa18.85■□□□□ 0.61
GCDH-208ENST00000588905 ALDH1A1P00352 501 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 PPP4CP60510 307 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 ERO1BQ86YB8 467 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 IFNL1Q8IU54 200 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 TEX11Q8IYF3 940 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.84■□□□□ 0.61
GCDH-208ENST00000588905 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 ZKSCAN4Q969J2 545 aaPredicted RBP18.84■□□□□ 0.61
GCDH-208ENST00000588905 SNCAIPQ9Y6H5 919 aa18.84■□□□□ 0.61
GCDH-208ENST00000588905 TESPA1A2RU30 521 aaPredicted RBP18.83■□□□□ 0.6
GCDH-208ENST00000588905 DDTLA6NHG4 134 aaPredicted RBP18.83■□□□□ 0.6
GCDH-208ENST00000588905 SPDYE5A6NIY4 337 aa18.83■□□□□ 0.6
GCDH-208ENST00000588905 GPR25O00155 361 aa18.83■□□□□ 0.6
GCDH-208ENST00000588905 IDH1O75874 414 aaKnown RBP18.83■□□□□ 0.6
GCDH-208ENST00000588905 PLCG2P16885 1265 aa18.83■□□□□ 0.6
GCDH-208ENST00000588905 INPP5BP32019 993 aa18.83■□□□□ 0.6
GCDH-208ENST00000588905 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.6
GCDH-208ENST00000588905 NOM1Q5C9Z4 860 aaKnown RBP18.83■□□□□ 0.6
GCDH-208ENST00000588905 AATFQ9NY61 560 aaKnown RBP eCLIP18.83■□□□□ 0.6
GCDH-208ENST00000588905 ZSWIM8A7E2V4 1837 aa18.83■□□□□ 0.6
GCDH-208ENST00000588905 RBBP6Q7Z6E9 1792 aaKnown RBP18.83■□□□□ 0.6
GCDH-208ENST00000588905 IGF2BP3O00425 579 aaKnown RBP eCLIP18.82■□□□□ 0.6
GCDH-208ENST00000588905 ATP5JP18859 108 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 CYP7A1P22680 504 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 GTF2A2P52657 109 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 MAP3K10Q02779 954 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 MAP3K12Q12852 859 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 OTUD7BQ6GQQ9 843 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 TMED8Q6PL24 325 aaPredicted RBP18.82■□□□□ 0.6
GCDH-208ENST00000588905 SH3RF3Q8TEJ3 882 aaPredicted RBP18.82■□□□□ 0.6
GCDH-208ENST00000588905 OTUD5Q96G74 571 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 MS4A4AQ96JQ5 239 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 HPS5Q9UPZ3 1129 aa18.82■□□□□ 0.6
GCDH-208ENST00000588905 ATRNL1Q5VV63 1379 aa18.81■□□□□ 0.6
GCDH-208ENST00000588905 TTF1Q15361 905 aaPredicted RBP18.81■□□□□ 0.6
GCDH-208ENST00000588905 ADGRA1Q86SQ6 560 aa18.81■□□□□ 0.6
GCDH-208ENST00000588905 BOLA2Q9H3K6 86 aa18.81■□□□□ 0.6
GCDH-208ENST00000588905 PPATQ06203 517 aa18.8■□□□□ 0.6
GCDH-208ENST00000588905 PPIL2Q13356 520 aa18.8■□□□□ 0.6
GCDH-208ENST00000588905 NOL9Q5SY16 702 aaKnown RBP18.8■□□□□ 0.6
GCDH-208ENST00000588905 MAGEB6Q8N7X4 407 aa18.8■□□□□ 0.6
GCDH-208ENST00000588905 PTPN18Q99952 460 aa18.8■□□□□ 0.6
GCDH-208ENST00000588905 OSBPL5Q9H0X9 879 aaPredicted RBP18.8■□□□□ 0.6
GCDH-208ENST00000588905 CCL15-CCL14A0A0B4J2E2 113 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 PHF20L1A8MW92 1017 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 GOLIM4O00461 696 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 TBC1D12O60347 775 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 CAP1Q01518 475 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 CCL15Q16663 113 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 BRI3BPQ8WY22 251 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 EDC3Q96F86 508 aaKnown RBP18.79■□□□□ 0.6
GCDH-208ENST00000588905 DNAJC2Q99543 621 aaKnown RBP18.79■□□□□ 0.6
GCDH-208ENST00000588905 HAUS7Q99871 368 aa18.79■□□□□ 0.6
GCDH-208ENST00000588905 IRF6O14896 467 aa18.78■□□□□ 0.6
GCDH-208ENST00000588905 CETPP11597 493 aa18.78■□□□□ 0.6
GCDH-208ENST00000588905 DYNLL1P63167 89 aaKnown RBP18.78■□□□□ 0.6
GCDH-208ENST00000588905 IRX6P78412 446 aaPredicted RBP18.78■□□□□ 0.6
GCDH-208ENST00000588905 SNAPC2Q13487 334 aa18.78■□□□□ 0.6
GCDH-208ENST00000588905 CERS3Q8IU89 383 aa18.78■□□□□ 0.6
GCDH-208ENST00000588905 ECHDC1Q9NTX5 307 aa18.78■□□□□ 0.6
GCDH-208ENST00000588905 CENPFP49454 3210 aa18.78■□□□□ 0.6
GCDH-208ENST00000588905 AK9Q5TCS8 1911 aa18.77■□□□□ 0.6
GCDH-208ENST00000588905 IGHDP01880 384 aa18.77■□□□□ 0.6
GCDH-208ENST00000588905 ANKRD45Q5TZF3 282 aa18.77■□□□□ 0.6
GCDH-208ENST00000588905 TGFBRAP1Q8WUH2 860 aa18.77■□□□□ 0.6
GCDH-208ENST00000588905 GCC1Q96CN9 775 aa18.77■□□□□ 0.6
GCDH-208ENST00000588905 DHX36Q9H2U1 1008 aaKnown RBP18.77■□□□□ 0.6
GCDH-208ENST00000588905 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
GCDH-208ENST00000588905 PAG1Q9NWQ8 432 aa18.77■□□□□ 0.6
GCDH-208ENST00000588905 COL2A1P02458 1487 aaPredicted RBP18.77■□□□□ 0.59
GCDH-208ENST00000588905 CTNND1O60716 968 aaKnown RBP18.76■□□□□ 0.59
GCDH-208ENST00000588905 FKTNO75072 461 aa18.76■□□□□ 0.59
GCDH-208ENST00000588905 SLURP2P0DP57 97 aa18.76■□□□□ 0.59
GCDH-208ENST00000588905 TSHZ3Q63HK5 1081 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms