RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 KIF23Q02241 960 aaPredicted RBP22.81■■□□□ 1.24
ERCC1-207ENST00000588738 MIGA2Q7L4E1 593 aa22.81■■□□□ 1.24
ERCC1-207ENST00000588738 EDC3Q96F86 508 aaKnown RBP22.81■■□□□ 1.24
ERCC1-207ENST00000588738 CLMNQ96JQ2 1002 aa22.81■■□□□ 1.24
ERCC1-207ENST00000588738 ZIC5Q96T25 663 aa22.81■■□□□ 1.24
ERCC1-207ENST00000588738 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.81■■□□□ 1.24
ERCC1-207ENST00000588738 OTOFQ9HC10 1997 aa22.8■■□□□ 1.24
ERCC1-207ENST00000588738 MAP3K9P80192 1104 aa22.8■■□□□ 1.24
ERCC1-207ENST00000588738 REM2Q8IYK8 340 aaPredicted RBP22.8■■□□□ 1.24
ERCC1-207ENST00000588738 CSRNP1Q96S65 589 aa22.8■■□□□ 1.24
ERCC1-207ENST00000588738 ZNF341Q9BYN7 854 aa22.8■■□□□ 1.24
ERCC1-207ENST00000588738 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.8■■□□□ 1.24
ERCC1-207ENST00000588738 TTC41PQ6P2S7 1318 aa22.8■■□□□ 1.24
ERCC1-207ENST00000588738 CDK5RAP2Q96SN8 1893 aa22.79■■□□□ 1.24
ERCC1-207ENST00000588738 PDE6AP16499 860 aa22.79■■□□□ 1.24
ERCC1-207ENST00000588738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.79■■□□□ 1.24
ERCC1-207ENST00000588738 CSADQ9Y600 493 aa22.79■■□□□ 1.24
ERCC1-207ENST00000588738 MYH7P12883 1935 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 FOCADQ5VW36 1801 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 ERC2O15083 957 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 IGHDP01880 384 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 DYNLL1P63167 89 aaKnown RBP22.78■■□□□ 1.24
ERCC1-207ENST00000588738 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.78■■□□□ 1.24
ERCC1-207ENST00000588738 SH3BP5LQ7L8J4 393 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 SMC5Q8IY18 1101 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 MIGA1Q8NAN2 632 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 WRNIP1Q96S55 665 aa22.78■■□□□ 1.24
ERCC1-207ENST00000588738 DDTLA6NHG4 134 aaPredicted RBP22.77■■□□□ 1.24
ERCC1-207ENST00000588738 MX1P20591 662 aa22.77■■□□□ 1.24
ERCC1-207ENST00000588738 SPRYD7Q5W111 196 aa22.77■■□□□ 1.24
ERCC1-207ENST00000588738 TSHZ3Q63HK5 1081 aa22.77■■□□□ 1.24
ERCC1-207ENST00000588738 TGFBRAP1Q8WUH2 860 aa22.77■■□□□ 1.24
ERCC1-207ENST00000588738 OSBPL5Q9H0X9 879 aaPredicted RBP22.77■■□□□ 1.24
ERCC1-207ENST00000588738 ZNF532Q9HCE3 1301 aa22.77■■□□□ 1.24
ERCC1-207ENST00000588738 ATRNL1Q5VV63 1379 aa22.76■■□□□ 1.23
ERCC1-207ENST00000588738 ZBTB48P10074 688 aaPredicted RBP22.76■■□□□ 1.23
ERCC1-207ENST00000588738 MKRN3Q13064 507 aaKnown RBP22.76■■□□□ 1.23
ERCC1-207ENST00000588738 VGLL4Q14135 290 aa22.76■■□□□ 1.23
ERCC1-207ENST00000588738 ZSCAN25Q6NSZ9 544 aa22.76■■□□□ 1.23
ERCC1-207ENST00000588738 OTUD7AQ8TE49 926 aaPredicted RBP22.76■■□□□ 1.23
ERCC1-207ENST00000588738 WNK4Q96J92 1243 aa22.76■■□□□ 1.23
ERCC1-207ENST00000588738 ELP3Q9H9T3 547 aa22.76■■□□□ 1.23
ERCC1-207ENST00000588738 COL2A1P02458 1487 aaPredicted RBP22.76■■□□□ 1.23
ERCC1-207ENST00000588738 MAGEB6P1A0A0J9YX57 407 aa22.75■■□□□ 1.23
ERCC1-207ENST00000588738 FOXN1O15353 648 aa22.75■■□□□ 1.23
ERCC1-207ENST00000588738 CA12O43570 354 aa22.75■■□□□ 1.23
ERCC1-207ENST00000588738 GLRX3O76003 335 aaKnown RBP22.75■■□□□ 1.23
ERCC1-207ENST00000588738 B4GALNT3Q6L9W6 998 aa22.75■■□□□ 1.23
ERCC1-207ENST00000588738 ZNF112Q9UJU3 913 aa22.75■■□□□ 1.23
ERCC1-207ENST00000588738 TCRBV5S4A2TA0A5A2 114 aa22.74■■□□□ 1.23
ERCC1-207ENST00000588738 ADD2P35612 726 aa22.74■■□□□ 1.23
ERCC1-207ENST00000588738 MAP3K10Q02779 954 aa22.74■■□□□ 1.23
ERCC1-207ENST00000588738 MAPKAPK5Q8IW41 473 aa22.74■■□□□ 1.23
ERCC1-207ENST00000588738 ZKSCAN4Q969J2 545 aaPredicted RBP22.74■■□□□ 1.23
ERCC1-207ENST00000588738 DHX36Q9H2U1 1008 aaKnown RBP22.74■■□□□ 1.23
ERCC1-207ENST00000588738 FLT1P17948 1338 aa22.74■■□□□ 1.23
ERCC1-207ENST00000588738 USP5P45974 858 aa22.73■■□□□ 1.23
ERCC1-207ENST00000588738 CTCFP49711 727 aaPredicted RBP22.73■■□□□ 1.23
ERCC1-207ENST00000588738 PI4K2BQ8TCG2 481 aa22.73■■□□□ 1.23
ERCC1-207ENST00000588738 OPTNQ96CV9 577 aa22.73■■□□□ 1.23
ERCC1-207ENST00000588738 RIOK1Q9BRS2 568 aaKnown RBP22.73■■□□□ 1.23
ERCC1-207ENST00000588738 LNPKQ9C0E8 428 aa22.73■■□□□ 1.23
ERCC1-207ENST00000588738 SALL3Q9BXA9 1300 aa22.73■■□□□ 1.23
ERCC1-207ENST00000588738 TBC1D12O60347 775 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 INPP5BP32019 993 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 TM4SF4P48230 202 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 INHBEP58166 350 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 SREBF2Q12772 1141 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 UBE3CQ15386 1083 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 KBTBD3Q8NAB2 608 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 PI4KBQ9UBF8 816 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 STAP2Q9UGK3 403 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 SNCAIPQ9Y6H5 919 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 MYH1P12882 1939 aa22.72■■□□□ 1.23
ERCC1-207ENST00000588738 LAMB1P07942 1786 aa22.71■■□□□ 1.23
ERCC1-207ENST00000588738 MANSC4A6NHS7 340 aaPredicted RBP22.71■■□□□ 1.23
ERCC1-207ENST00000588738 NUCB1Q02818 461 aa22.71■■□□□ 1.23
ERCC1-207ENST00000588738 CHD1LQ86WJ1 897 aa22.71■■□□□ 1.23
ERCC1-207ENST00000588738 ERO1BQ86YB8 467 aa22.71■■□□□ 1.23
ERCC1-207ENST00000588738 CRNKL1Q9BZJ0 848 aaKnown RBP22.71■■□□□ 1.23
ERCC1-207ENST00000588738 SPDYE5A6NIY4 337 aa22.7■■□□□ 1.22
ERCC1-207ENST00000588738 PHF20L1A8MW92 1017 aa22.7■■□□□ 1.22
ERCC1-207ENST00000588738 GJA5P36382 358 aa22.7■■□□□ 1.22
ERCC1-207ENST00000588738 PDE1AP54750 535 aa22.7■■□□□ 1.22
ERCC1-207ENST00000588738 LRRFIP1Q32MZ4 808 aaKnown RBP22.7■■□□□ 1.22
ERCC1-207ENST00000588738 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
ERCC1-207ENST00000588738 HERC5Q9UII4 1024 aaKnown RBP22.7■■□□□ 1.22
ERCC1-207ENST00000588738 SLFNL1Q499Z3 407 aa22.69■■□□□ 1.22
ERCC1-207ENST00000588738 CNKSR2Q8WXI2 1034 aa22.69■■□□□ 1.22
ERCC1-207ENST00000588738 OTUD5Q96G74 571 aa22.69■■□□□ 1.22
ERCC1-207ENST00000588738 SAGE1Q9NXZ1 904 aa22.69■■□□□ 1.22
ERCC1-207ENST00000588738 SAP30BPQ9UHR5 308 aaKnown RBP22.69■■□□□ 1.22
ERCC1-207ENST00000588738 PALD1Q9ULE6 856 aa22.69■■□□□ 1.22
ERCC1-207ENST00000588738 TRPA1O75762 1119 aa22.68■■□□□ 1.22
ERCC1-207ENST00000588738 HLA-DOAP06340 250 aa22.68■■□□□ 1.22
ERCC1-207ENST00000588738 ZFYP08048 801 aaPredicted RBP22.68■■□□□ 1.22
ERCC1-207ENST00000588738 NOL9Q5SY16 702 aaKnown RBP22.68■■□□□ 1.22
ERCC1-207ENST00000588738 FOXP4Q8IVH2 680 aaPredicted RBP22.68■■□□□ 1.22
ERCC1-207ENST00000588738 RNF186Q9NXI6 227 aa22.68■■□□□ 1.22
ERCC1-207ENST00000588738 CTNND1O60716 968 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms