RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ATRNL1Q5VV63 1379 aa23.38■■□□□ 1.33
CIRBP-217ENST00000588230 IGF2BP3O00425 579 aaKnown RBP eCLIP23.37■■□□□ 1.33
CIRBP-217ENST00000588230 WDHD1O75717 1129 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-217ENST00000588230 TBC1D8O95759 1140 aa23.37■■□□□ 1.33
CIRBP-217ENST00000588230 BAG3O95817 575 aa23.37■■□□□ 1.33
CIRBP-217ENST00000588230 RHBDL3P58872 404 aa23.37■■□□□ 1.33
CIRBP-217ENST00000588230 MAP3K9P80192 1104 aa23.37■■□□□ 1.33
CIRBP-217ENST00000588230 TTF1Q15361 905 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-217ENST00000588230 ZFPM1Q8IX07 1006 aa23.37■■□□□ 1.33
CIRBP-217ENST00000588230 DNAJC2Q99543 621 aaKnown RBP23.37■■□□□ 1.33
CIRBP-217ENST00000588230 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
CIRBP-217ENST00000588230 MAP3K12Q12852 859 aa23.36■■□□□ 1.33
CIRBP-217ENST00000588230 PICALMQ13492 652 aa23.36■■□□□ 1.33
CIRBP-217ENST00000588230 IFNL1Q8IU54 200 aa23.36■■□□□ 1.33
CIRBP-217ENST00000588230 ZSCAN29Q8IWY8 852 aaPredicted RBP23.36■■□□□ 1.33
CIRBP-217ENST00000588230 OPTNQ96CV9 577 aa23.36■■□□□ 1.33
CIRBP-217ENST00000588230 SNCAIPQ9Y6H5 919 aa23.36■■□□□ 1.33
CIRBP-217ENST00000588230 MYO5AQ9Y4I1 1855 aaKnown RBP23.36■■□□□ 1.33
CIRBP-217ENST00000588230 TESPA1A2RU30 521 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-217ENST00000588230 ATP5JP18859 108 aa23.35■■□□□ 1.33
CIRBP-217ENST00000588230 CYP7A1P22680 504 aa23.35■■□□□ 1.33
CIRBP-217ENST00000588230 NOM1Q5C9Z4 860 aaKnown RBP23.35■■□□□ 1.33
CIRBP-217ENST00000588230 MIGA2Q7L4E1 593 aa23.35■■□□□ 1.33
CIRBP-217ENST00000588230 MS4A4AQ96JQ5 239 aa23.35■■□□□ 1.33
CIRBP-217ENST00000588230 AATFQ9NY61 560 aaKnown RBP eCLIP23.35■■□□□ 1.33
CIRBP-217ENST00000588230 GOLIM4O00461 696 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 PLCG2P16885 1265 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 INHBEP58166 350 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 TEX11Q8IYF3 940 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 WRNIP1Q96S55 665 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 PTPN18Q99952 460 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 ZNF341Q9BYN7 854 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 BOLA2Q9H3K6 86 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 DDX4Q9NQI0 724 aaKnown RBP23.34■■□□□ 1.33
CIRBP-217ENST00000588230 CSADQ9Y600 493 aa23.34■■□□□ 1.33
CIRBP-217ENST00000588230 MAST2Q6P0Q8 1798 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 NPM3O75607 178 aaKnown RBP23.33■■□□□ 1.33
CIRBP-217ENST00000588230 PPP4CP60510 307 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 DGKZQ13574 1117 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 SH3BP5LQ7L8J4 393 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 ADGRA1Q86SQ6 560 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 SH3RF3Q8TEJ3 882 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-217ENST00000588230 ZNF296Q8WUU4 475 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-217ENST00000588230 ZKSCAN4Q969J2 545 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-217ENST00000588230 ZNF112Q9UJU3 913 aa23.33■■□□□ 1.33
CIRBP-217ENST00000588230 DOCK2Q92608 1830 aa23.32■■□□□ 1.32
CIRBP-217ENST00000588230 SPDYE5A6NIY4 337 aa23.32■■□□□ 1.32
CIRBP-217ENST00000588230 GPR25O00155 361 aa23.32■■□□□ 1.32
CIRBP-217ENST00000588230 TMED8Q6PL24 325 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-217ENST00000588230 GPATCH3Q96I76 525 aa23.32■■□□□ 1.32
CIRBP-217ENST00000588230 ECHDC1Q9NTX5 307 aa23.32■■□□□ 1.32
CIRBP-217ENST00000588230 ZBTB47Q9UFB7 747 aaPredicted RBP23.32■■□□□ 1.32
CIRBP-217ENST00000588230 ALDH1A1P00352 501 aa23.31■■□□□ 1.32
CIRBP-217ENST00000588230 INPP5BP32019 993 aa23.31■■□□□ 1.32
CIRBP-217ENST00000588230 HDAC1Q13547 482 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-217ENST00000588230 HAUS7Q99871 368 aa23.31■■□□□ 1.32
CIRBP-217ENST00000588230 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
CIRBP-217ENST00000588230 HTTP42858 3142 aa23.31■■□□□ 1.32
CIRBP-217ENST00000588230 BRI3BPQ8WY22 251 aa23.3■■□□□ 1.32
CIRBP-217ENST00000588230 EDC3Q96F86 508 aaKnown RBP23.3■■□□□ 1.32
CIRBP-217ENST00000588230 OTUD5Q96G74 571 aa23.3■■□□□ 1.32
CIRBP-217ENST00000588230 DDTLA6NHG4 134 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-217ENST00000588230 SLC9C2Q5TAH2 1124 aa23.29■■□□□ 1.32
CIRBP-217ENST00000588230 ERO1BQ86YB8 467 aa23.29■■□□□ 1.32
CIRBP-217ENST00000588230 MIGA1Q8NAN2 632 aa23.29■■□□□ 1.32
CIRBP-217ENST00000588230 PDE6AP16499 860 aa23.28■■□□□ 1.32
CIRBP-217ENST00000588230 DYNLL1P63167 89 aaKnown RBP23.28■■□□□ 1.32
CIRBP-217ENST00000588230 MAP3K10Q02779 954 aa23.28■■□□□ 1.32
CIRBP-217ENST00000588230 CTU1Q7Z7A3 348 aaKnown RBP23.28■■□□□ 1.32
CIRBP-217ENST00000588230 CERS3Q8IU89 383 aa23.28■■□□□ 1.32
CIRBP-217ENST00000588230 GCC1Q96CN9 775 aa23.28■■□□□ 1.32
CIRBP-217ENST00000588230 OSBPL5Q9H0X9 879 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-217ENST00000588230 RWDD1Q9H446 243 aaPredicted RBP23.28■■□□□ 1.32
CIRBP-217ENST00000588230 PHF20L1A8MW92 1017 aa23.27■■□□□ 1.32
CIRBP-217ENST00000588230 SLURP2P0DP57 97 aa23.27■■□□□ 1.32
CIRBP-217ENST00000588230 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
CIRBP-217ENST00000588230 TGFBRAP1Q8WUH2 860 aa23.27■■□□□ 1.32
CIRBP-217ENST00000588230 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.27■■□□□ 1.321e-7■■■□□ 16.4
CIRBP-217ENST00000588230 COL2A1P02458 1487 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-217ENST00000588230 IRF6O14896 467 aa23.26■■□□□ 1.31
CIRBP-217ENST00000588230 GTF2A2P52657 109 aa23.26■■□□□ 1.31
CIRBP-217ENST00000588230 CRHR2Q13324 411 aa23.26■■□□□ 1.31
CIRBP-217ENST00000588230 PPIL2Q13356 520 aa23.26■■□□□ 1.31
CIRBP-217ENST00000588230 NOL9Q5SY16 702 aaKnown RBP23.26■■□□□ 1.31
CIRBP-217ENST00000588230 MAPKAPK5Q8IW41 473 aa23.26■■□□□ 1.31
CIRBP-217ENST00000588230 CCL15-CCL14A0A0B4J2E2 113 aa23.25■■□□□ 1.31
CIRBP-217ENST00000588230 CCL15Q16663 113 aa23.25■■□□□ 1.31
CIRBP-217ENST00000588230 ZNF532Q9HCE3 1301 aa23.25■■□□□ 1.31
CIRBP-217ENST00000588230 MAGEB6P1A0A0J9YX57 407 aa23.24■■□□□ 1.31
CIRBP-217ENST00000588230 FKTNO75072 461 aa23.24■■□□□ 1.31
CIRBP-217ENST00000588230 TSHZ3Q63HK5 1081 aa23.24■■□□□ 1.31
CIRBP-217ENST00000588230 FAM43AQ8N2R8 423 aa23.24■■□□□ 1.31
CIRBP-217ENST00000588230 DHX36Q9H2U1 1008 aaKnown RBP23.24■■□□□ 1.31
CIRBP-217ENST00000588230 USP5P45974 858 aa23.23■■□□□ 1.31
CIRBP-217ENST00000588230 IRX6P78412 446 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-217ENST00000588230 PPATQ06203 517 aa23.23■■□□□ 1.31
CIRBP-217ENST00000588230 FLT1P17948 1338 aa23.23■■□□□ 1.31
CIRBP-217ENST00000588230 TTC41PQ6P2S7 1318 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms