RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 NBPF11Q86T75 865 aa21.23■□□□□ 0.99
GCDH-206ENST00000587832 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.23■□□□□ 0.99
GCDH-206ENST00000587832 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
GCDH-206ENST00000587832 CXCL11O14625 94 aa21.22■□□□□ 0.99
GCDH-206ENST00000587832 NPM3O75607 178 aaKnown RBP21.22■□□□□ 0.99
GCDH-206ENST00000587832 ARID4AP29374 1257 aaPredicted RBP21.22■□□□□ 0.99
GCDH-206ENST00000587832 SH3BP5LQ7L8J4 393 aa21.22■□□□□ 0.99
GCDH-206ENST00000587832 SCYL3Q8IZE3 742 aa21.22■□□□□ 0.99
GCDH-206ENST00000587832 ARHGAP39Q9C0H5 1083 aa21.22■□□□□ 0.99
GCDH-206ENST00000587832 GPR75-ASB3A0A0A6YYF3 556 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 PDHXO00330 501 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
GCDH-206ENST00000587832 BTDP43251 543 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 MECOMQ03112 1051 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 ERICH6Q7L0X2 663 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 FRAT1Q92837 279 aaPredicted RBP21.21■□□□□ 0.99
GCDH-206ENST00000587832 HMG20BQ9P0W2 317 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 TNNQ9UQP3 1299 aa21.21■□□□□ 0.99
GCDH-206ENST00000587832 LOC285556D6RIA3 1793 aa21.2■□□□□ 0.99
GCDH-206ENST00000587832 PNMA6EA0A0J9YXQ4 647 aa21.2■□□□□ 0.98
GCDH-206ENST00000587832 RHBDL3P58872 404 aa21.2■□□□□ 0.98
GCDH-206ENST00000587832 SPATA5Q8NB90 893 aa21.2■□□□□ 0.98
GCDH-206ENST00000587832 ZNF384Q8TF68 577 aa21.2■□□□□ 0.98
GCDH-206ENST00000587832 NEUROD6Q96NK8 337 aa21.2■□□□□ 0.98
GCDH-206ENST00000587832 DDX4Q9NQI0 724 aaKnown RBP21.2■□□□□ 0.98
GCDH-206ENST00000587832 BRCA2P51587 3418 aa21.19■□□□□ 0.98
GCDH-206ENST00000587832 DDTLA6NHG4 134 aaPredicted RBP21.19■□□□□ 0.98
GCDH-206ENST00000587832 CLUAP1Q96AJ1 413 aa21.19■□□□□ 0.98
GCDH-206ENST00000587832 TMEM106CQ9BVX2 250 aa21.19■□□□□ 0.98
GCDH-206ENST00000587832 MYO5AQ9Y4I1 1855 aaKnown RBP21.18■□□□□ 0.98
GCDH-206ENST00000587832 PTPRAP18433 802 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 GSTO1P78417 241 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 GORABQ5T7V8 394 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 ZSCAN29Q8IWY8 852 aaPredicted RBP21.18■□□□□ 0.98
GCDH-206ENST00000587832 NSUN4Q96CB9 384 aaKnown RBP21.18■□□□□ 0.98
GCDH-206ENST00000587832 PARK7Q99497 189 aaKnown RBP21.18■□□□□ 0.98
GCDH-206ENST00000587832 PICK1Q9NRD5 415 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 CPA4Q9UI42 421 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 SIPA1L1O43166 1804 aa21.18■□□□□ 0.98
GCDH-206ENST00000587832 MKI67P46013 3256 aaKnown RBP21.17■□□□□ 0.98
GCDH-206ENST00000587832 A0A0G2JLL6 359 aaPredicted RBP21.17■□□□□ 0.98
GCDH-206ENST00000587832 TBC1D12O60347 775 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 CTNND1O60716 968 aaKnown RBP21.17■□□□□ 0.98
GCDH-206ENST00000587832 LDHCP07864 332 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 UQCRFS1P1P0C7P4 283 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 EN2P19622 333 aaPredicted RBP21.17■□□□□ 0.98
GCDH-206ENST00000587832 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
GCDH-206ENST00000587832 GPAT2Q6NUI2 795 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 PI16Q6UXB8 463 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 FASTKD5Q7L8L6 764 aaKnown RBP21.17■□□□□ 0.98
GCDH-206ENST00000587832 PRRT2Q7Z6L0 340 aaPredicted RBP21.17■□□□□ 0.98
GCDH-206ENST00000587832 TMEM57Q8N5G2 664 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 GPR108Q9NPR9 543 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 SLC45A1Q9Y2W3 748 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 AFG3L2Q9Y4W6 797 aa21.17■□□□□ 0.98
GCDH-206ENST00000587832 MCAMP43121 646 aa21.16■□□□□ 0.98
GCDH-206ENST00000587832 PICALMQ13492 652 aa21.16■□□□□ 0.98
GCDH-206ENST00000587832 POLA2Q14181 598 aa21.16■□□□□ 0.98
GCDH-206ENST00000587832 TRIM47Q96LD4 638 aa21.16■□□□□ 0.98
GCDH-206ENST00000587832 SRRDQ9UH36 339 aa21.16■□□□□ 0.98
GCDH-206ENST00000587832 ZHX2Q9Y6X8 837 aa21.16■□□□□ 0.98
GCDH-206ENST00000587832 BCRP11274 1271 aa21.15■□□□□ 0.98
GCDH-206ENST00000587832 CTGFP29279 349 aa21.15■□□□□ 0.98
GCDH-206ENST00000587832 SSH3Q8TE77 659 aa21.15■□□□□ 0.98
GCDH-206ENST00000587832 IGSF3O75054 1194 aa21.14■□□□□ 0.97
GCDH-206ENST00000587832 HOXD10P28358 340 aa21.14■□□□□ 0.97
GCDH-206ENST00000587832 PSMC4P43686 418 aa21.14■□□□□ 0.97
GCDH-206ENST00000587832 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.97
GCDH-206ENST00000587832 GCC1Q96CN9 775 aa21.14■□□□□ 0.97
GCDH-206ENST00000587832 OSBPP22059 807 aa21.13■□□□□ 0.97
GCDH-206ENST00000587832 SH3TC2Q8TF17 1288 aa21.13■□□□□ 0.97
GCDH-206ENST00000587832 OSBPL5Q9H0X9 879 aaPredicted RBP21.13■□□□□ 0.97
GCDH-206ENST00000587832 RAI14Q9P0K7 980 aa21.13■□□□□ 0.97
GCDH-206ENST00000587832 CYP2C8P10632 490 aa21.12■□□□□ 0.97
GCDH-206ENST00000587832 SLC4A8Q2Y0W8 1093 aa21.12■□□□□ 0.97
GCDH-206ENST00000587832 TNNI3KQ59H18 835 aa21.12■□□□□ 0.97
GCDH-206ENST00000587832 FPGT-TNNI3KV9GXZ4 949 aa21.12■□□□□ 0.97
GCDH-206ENST00000587832 FCGRTP55899 365 aa21.11■□□□□ 0.97
GCDH-206ENST00000587832 ATP8B2P98198 1209 aa21.11■□□□□ 0.97
GCDH-206ENST00000587832 ZNF512BQ96KM6 892 aaPredicted RBP21.11■□□□□ 0.97
GCDH-206ENST00000587832 TBC1D2Q9BYX2 928 aa21.11■□□□□ 0.97
GCDH-206ENST00000587832 LRP2BPQ9P2M1 347 aa21.11■□□□□ 0.97
GCDH-206ENST00000587832 MYPNQ86TC9 1320 aa21.1■□□□□ 0.97
GCDH-206ENST00000587832 FMNL1O95466 1100 aaPredicted RBP21.1■□□□□ 0.97
GCDH-206ENST00000587832 SLURP2P0DP57 97 aa21.1■□□□□ 0.97
GCDH-206ENST00000587832 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.1■□□□□ 0.97
GCDH-206ENST00000587832 PCDH10Q9P2E7 1040 aa21.1■□□□□ 0.97
GCDH-206ENST00000587832 HERC5Q9UII4 1024 aaKnown RBP21.1■□□□□ 0.97
GCDH-206ENST00000587832 AGTPBP1Q9UPW5 1226 aa21.1■□□□□ 0.97
GCDH-206ENST00000587832 GRK4P32298 578 aa21.09■□□□□ 0.97
GCDH-206ENST00000587832 HNRNPUQ00839 825 aaKnown RBP eCLIP21.09■□□□□ 0.97
GCDH-206ENST00000587832 CCDC158Q5M9N0 1113 aa21.09■□□□□ 0.97
GCDH-206ENST00000587832 GADL1Q6ZQY3 521 aa21.09■□□□□ 0.97
GCDH-206ENST00000587832 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
GCDH-206ENST00000587832 PROCA1Q8NCQ7 364 aaPredicted RBP21.09■□□□□ 0.97
GCDH-206ENST00000587832 RAET1EQ8TD07 263 aa21.09■□□□□ 0.97
GCDH-206ENST00000587832 DBNDD2Q9BQY9 259 aa21.09■□□□□ 0.97
GCDH-206ENST00000587832 NOL10Q9BSC4 688 aaKnown RBP21.09■□□□□ 0.97
GCDH-206ENST00000587832 NOP58Q9Y2X3 529 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms