RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 AATFQ9NY61 560 aaKnown RBP eCLIP28.63■■■□□ 2.17
CHAF1A-205ENST00000587580 TRPA1O75762 1119 aa28.62■■■□□ 2.17
CHAF1A-205ENST00000587580 BAG3O95817 575 aa28.62■■■□□ 2.17
CHAF1A-205ENST00000587580 ADGRA1Q86SQ6 560 aa28.62■■■□□ 2.17
CHAF1A-205ENST00000587580 DNAJC2Q99543 621 aaKnown RBP28.62■■■□□ 2.17
CHAF1A-205ENST00000587580 GJA5P36382 358 aa28.61■■■□□ 2.17
CHAF1A-205ENST00000587580 TEX11Q8IYF3 940 aa28.61■■■□□ 2.17
CHAF1A-205ENST00000587580 SH3RF3Q8TEJ3 882 aaPredicted RBP28.61■■■□□ 2.17
CHAF1A-205ENST00000587580 OPTNQ96CV9 577 aa28.61■■■□□ 2.17
CHAF1A-205ENST00000587580 MANSC4A6NHS7 340 aaPredicted RBP28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 CYP7A1P22680 504 aa28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 TM4SF4P48230 202 aa28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 MAP3K12Q12852 859 aa28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 TTF1Q15361 905 aaPredicted RBP28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 SH3BP5LQ7L8J4 393 aa28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 MAGEB6Q8N7X4 407 aa28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 ATRNL1Q5VV63 1379 aa28.6■■■□□ 2.17
CHAF1A-205ENST00000587580 DDTLA6NHG4 134 aaPredicted RBP28.59■■■□□ 2.17
CHAF1A-205ENST00000587580 NPM3O75607 178 aaKnown RBP28.59■■■□□ 2.17
CHAF1A-205ENST00000587580 PLCG2P16885 1265 aa28.59■■■□□ 2.17
CHAF1A-205ENST00000587580 CNKSR2Q8WXI2 1034 aa28.59■■■□□ 2.17
CHAF1A-205ENST00000587580 ZKSCAN4Q969J2 545 aaPredicted RBP28.59■■■□□ 2.17
CHAF1A-205ENST00000587580 SNCAIPQ9Y6H5 919 aa28.59■■■□□ 2.17
CHAF1A-205ENST00000587580 CDK5RAP2Q96SN8 1893 aa28.58■■■□□ 2.17
CHAF1A-205ENST00000587580 GOLIM4O00461 696 aa28.58■■■□□ 2.17
CHAF1A-205ENST00000587580 PPP4CP60510 307 aa28.58■■■□□ 2.17
CHAF1A-205ENST00000587580 BOLA2Q9H3K6 86 aa28.58■■■□□ 2.17
CHAF1A-205ENST00000587580 ATP5JP18859 108 aa28.57■■■□□ 2.16
CHAF1A-205ENST00000587580 INPP5BP32019 993 aa28.57■■■□□ 2.16
CHAF1A-205ENST00000587580 TNS4Q8IZW8 715 aa28.57■■■□□ 2.16
CHAF1A-205ENST00000587580 OSBPL5Q9H0X9 879 aaPredicted RBP28.57■■■□□ 2.16
CHAF1A-205ENST00000587580 COL2A1P02458 1487 aaPredicted RBP28.57■■■□□ 2.16
CHAF1A-205ENST00000587580 FOCADQ5VW36 1801 aa28.57■■■□□ 2.16
CHAF1A-205ENST00000587580 OTUD5Q96G74 571 aa28.56■■■□□ 2.16
CHAF1A-205ENST00000587580 ZNF112Q9UJU3 913 aa28.56■■■□□ 2.16
CHAF1A-205ENST00000587580 SPDYE5A6NIY4 337 aa28.55■■■□□ 2.16
CHAF1A-205ENST00000587580 INHBEP58166 350 aa28.55■■■□□ 2.16
CHAF1A-205ENST00000587580 DYNLL1P63167 89 aaKnown RBP28.55■■■□□ 2.16
CHAF1A-205ENST00000587580 MIGA1Q8NAN2 632 aa28.55■■■□□ 2.16
CHAF1A-205ENST00000587580 EDC3Q96F86 508 aaKnown RBP28.55■■■□□ 2.16
CHAF1A-205ENST00000587580 CASP8AP2Q9UKL3 1982 aa28.54■■■□□ 2.16
CHAF1A-205ENST00000587580 TMED8Q6PL24 325 aaPredicted RBP28.54■■■□□ 2.16
CHAF1A-205ENST00000587580 ERO1BQ86YB8 467 aa28.54■■■□□ 2.16
CHAF1A-205ENST00000587580 TGFBRAP1Q8WUH2 860 aa28.54■■■□□ 2.16
CHAF1A-205ENST00000587580 PAG1Q9NWQ8 432 aa28.54■■■□□ 2.16
CHAF1A-205ENST00000587580 HAUS7Q99871 368 aa28.53■■■□□ 2.16
CHAF1A-205ENST00000587580 FLT1P17948 1338 aa28.52■■■□□ 2.16
CHAF1A-205ENST00000587580 SLURP2P0DP57 97 aa28.52■■■□□ 2.16
CHAF1A-205ENST00000587580 IFNL1Q8IU54 200 aa28.52■■■□□ 2.16
CHAF1A-205ENST00000587580 MAPKAPK5Q8IW41 473 aa28.52■■■□□ 2.16
CHAF1A-205ENST00000587580 SUPT16HQ9Y5B9 1047 aaKnown RBP28.52■■■□□ 2.16
CHAF1A-205ENST00000587580 IGF2BP3O00425 579 aaKnown RBP eCLIP28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 TBC1D8O95759 1140 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 PDE6AP16499 860 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 AAMPQ13685 434 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 NOL9Q5SY16 702 aaKnown RBP28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 SLC9C2Q5TAH2 1124 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 CERS3Q8IU89 383 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 GPATCH3Q96I76 525 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 ECHDC1Q9NTX5 307 aa28.51■■■□□ 2.15
CHAF1A-205ENST00000587580 PHF20L1A8MW92 1017 aa28.5■■■□□ 2.15
CHAF1A-205ENST00000587580 ALDH1A1P00352 501 aa28.5■■■□□ 2.15
CHAF1A-205ENST00000587580 GTF2A2P52657 109 aa28.5■■■□□ 2.15
CHAF1A-205ENST00000587580 MAP3K10Q02779 954 aa28.5■■■□□ 2.15
CHAF1A-205ENST00000587580 MS4A4AQ96JQ5 239 aa28.5■■■□□ 2.15
CHAF1A-205ENST00000587580 TESPA1A2RU30 521 aaPredicted RBP28.49■■■□□ 2.15
CHAF1A-205ENST00000587580 PPIL2Q13356 520 aa28.49■■■□□ 2.15
CHAF1A-205ENST00000587580 DOCK1Q14185 1865 aa28.49■■■□□ 2.15
CHAF1A-205ENST00000587580 SIPA1L1O43166 1804 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 ZNF532Q9HCE3 1301 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 MYH7P12883 1935 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 CCL15-CCL14A0A0B4J2E2 113 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 FAM196BA6NMK8 535 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 TBC1D12O60347 775 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 PPATQ06203 517 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 HDAC1Q13547 482 aaPredicted RBP28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 CCL15Q16663 113 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 EXOC6Q8TAG9 804 aa28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 DHX36Q9H2U1 1008 aaKnown RBP28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.48■■■□□ 2.15
CHAF1A-205ENST00000587580 IRF6O14896 467 aa28.47■■■□□ 2.15
CHAF1A-205ENST00000587580 TSHZ3Q63HK5 1081 aa28.47■■■□□ 2.15
CHAF1A-205ENST00000587580 OTUD7BQ6GQQ9 843 aa28.47■■■□□ 2.15
CHAF1A-205ENST00000587580 SCYL3Q8IZE3 742 aa28.47■■■□□ 2.15
CHAF1A-205ENST00000587580 BRI3BPQ8WY22 251 aa28.47■■■□□ 2.15
CHAF1A-205ENST00000587580 MAGEB6P1A0A0J9YX57 407 aa28.46■■■□□ 2.15
CHAF1A-205ENST00000587580 USP5P45974 858 aa28.46■■■□□ 2.15
CHAF1A-205ENST00000587580 PTPN18Q99952 460 aa28.46■■■□□ 2.15
CHAF1A-205ENST00000587580 RIOK1Q9BRS2 568 aaKnown RBP28.46■■■□□ 2.15
CHAF1A-205ENST00000587580 CFHR5Q9BXR6 569 aa28.46■■■□□ 2.15
CHAF1A-205ENST00000587580 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.46■■■□□ 2.15
CHAF1A-205ENST00000587580 MYH1P12882 1939 aa28.45■■■□□ 2.15
CHAF1A-205ENST00000587580 TCRBV5S4A2TA0A5A2 114 aa28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 SNAPC2Q13487 334 aa28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 GCC1Q96CN9 775 aa28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 PICK1Q9NRD5 415 aa28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 PI4KBQ9UBF8 816 aa28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 ZBTB47Q9UFB7 747 aaPredicted RBP28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 SAP30BPQ9UHR5 308 aaKnown RBP28.45■■■□□ 2.14
CHAF1A-205ENST00000587580 CTNND1O60716 968 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms