RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 METTL24Q5JXM2 366 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 IER5LQ5T953 404 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 APOBEC3HQ6NTF7 200 aaKnown RBP9.68□□□□□ -0.86
VMP1-204ENST00000587259 FBXO33Q7Z6M2 555 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 ITPRIPQ8IWB1 547 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 SRCIN1Q9C0H9 1055 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 RWDD1Q9H446 243 aaPredicted RBP9.68□□□□□ -0.86
VMP1-204ENST00000587259 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
VMP1-204ENST00000587259 CEP290O15078 2479 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 UNCXA6NJT0 531 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 TLR2O60603 784 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 TNNI2P48788 182 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 TCP10Q12799 353 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 VGLL2Q8N8G2 317 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 TEKT1Q969V4 418 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 SHISA4Q96DD7 197 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 TRIOBPQ9H2D6 2365 aa9.67□□□□□ -0.86
VMP1-204ENST00000587259 SZT2Q5T011 3432 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 ALDH1L1O75891 902 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 CETPP11597 493 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 NFIAQ12857 509 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 DIXDC1Q155Q3 683 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 ERO1BQ86YB8 467 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 ZFPM1Q8IX07 1006 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 TRIM47Q96LD4 638 aa9.66□□□□□ -0.86
VMP1-204ENST00000587259 MROH5Q6ZUA9 1318 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 PDHXO00330 501 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 CHRM1P11229 460 aaPredicted RBP9.65□□□□□ -0.86
VMP1-204ENST00000587259 RLBP1P12271 317 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 PSMC4P43686 418 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.86
VMP1-204ENST00000587259 CAVIN4Q5BKX8 364 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 NBPF11Q86T75 865 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 ZDHHC15Q96MV8 337 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 TSHZ2Q9NRE2 1034 aa9.65□□□□□ -0.86
VMP1-204ENST00000587259 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.65□□□□□ -0.86
VMP1-204ENST00000587259 PDE8BO95263 885 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 CYP2C8P10632 490 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 PLCG2P16885 1265 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 OSBPP22059 807 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 PRDX5P30044 214 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 PPIL2Q13356 520 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 MOGSQ13724 837 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 KIF22Q14807 665 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
VMP1-204ENST00000587259 CDC42EP5Q6NZY7 148 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 C17orf99Q6UX52 265 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
VMP1-204ENST00000587259 CCDC84Q86UT8 332 aaPredicted RBP9.64□□□□□ -0.87
VMP1-204ENST00000587259 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 DPF3Q92784 378 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 TMOD2Q9NZR1 351 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
VMP1-204ENST00000587259 GABRQQ9UN88 632 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 DAGLAQ9Y4D2 1042 aa9.64□□□□□ -0.87
VMP1-204ENST00000587259 UTYO14607 1347 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 ADGRA2Q96PE1 1338 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 RANBP2P49792 3224 aaKnown RBP9.63□□□□□ -0.87
VMP1-204ENST00000587259 POTEMA6NI47 508 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 FMNL1O95466 1100 aaPredicted RBP9.63□□□□□ -0.87
VMP1-204ENST00000587259 FGFR2P21802 821 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 TBC1D22AQ8WUA7 517 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 ZNF341Q9BYN7 854 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 SIL1Q9H173 461 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 ZBTB40Q9NUA8 1239 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
VMP1-204ENST00000587259 CCL5P13501 91 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 RFX5P48382 616 aaPredicted RBP9.62□□□□□ -0.87
VMP1-204ENST00000587259 IRX5P78411 483 aaPredicted RBP9.62□□□□□ -0.87
VMP1-204ENST00000587259 HDLBPQ00341 1268 aaKnown RBP9.62□□□□□ -0.87
VMP1-204ENST00000587259 PRKCZQ05513 592 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 PUM3Q15397 648 aaKnown RBP9.62□□□□□ -0.87
VMP1-204ENST00000587259 GPAT2Q6NUI2 795 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 FAM83AQ86UY5 434 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 RAET1EQ8TD07 263 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 USP44Q9H0E7 712 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
VMP1-204ENST00000587259 SRRDQ9UH36 339 aa9.62□□□□□ -0.87
VMP1-204ENST00000587259 MYPNQ86TC9 1320 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
VMP1-204ENST00000587259 ELNP15502 786 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 GRK4P32298 578 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 PPATQ06203 517 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 ARHGEF6Q15052 776 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 DCAF15Q66K64 600 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 HHIPL2Q6UWX4 724 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 SH3BP5LQ7L8J4 393 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 ATG9AQ7Z3C6 839 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 ANKRD23Q86SG2 305 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 FAM151AQ8WW52 585 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 FAM163AQ96GL9 167 aaPredicted RBP9.61□□□□□ -0.87
VMP1-204ENST00000587259 RNF208Q9H0X6 261 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 UNC93B1Q9H1C4 597 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 USP40Q9NVE5 1235 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 KCNH4Q9UQ05 1017 aa9.61□□□□□ -0.87
VMP1-204ENST00000587259 PA2G4Q9UQ80 394 aaKnown RBP9.61□□□□□ -0.87
VMP1-204ENST00000587259 FAM196BA6NMK8 535 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 EYA2O00167 538 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms