RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 FRAT1Q92837 279 aaPredicted RBP19.41■□□□□ 0.7
VAT1-205ENST00000587173 FAM163AQ96GL9 167 aaPredicted RBP19.41■□□□□ 0.7
VAT1-205ENST00000587173 PARK7Q99497 189 aaKnown RBP19.41■□□□□ 0.7
VAT1-205ENST00000587173 DDX4Q9NQI0 724 aaKnown RBP19.41■□□□□ 0.7
VAT1-205ENST00000587173 PICK1Q9NRD5 415 aa19.41■□□□□ 0.7
VAT1-205ENST00000587173 PCDH10Q9P2E7 1040 aa19.41■□□□□ 0.7
VAT1-205ENST00000587173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.41■□□□□ 0.7
VAT1-205ENST00000587173 MROH7-TTC4A0A0A0MT08 1334 aa19.41■□□□□ 0.7
VAT1-205ENST00000587173 ZSWIM8A7E2V4 1837 aa19.41■□□□□ 0.7
VAT1-205ENST00000587173 MKI67P46013 3256 aaKnown RBP19.41■□□□□ 0.7
VAT1-205ENST00000587173 DDTLA6NHG4 134 aaPredicted RBP19.4■□□□□ 0.7
VAT1-205ENST00000587173 TRIM27P14373 513 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 PTPRAP18433 802 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 GPAT2Q6NUI2 795 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 TRIM47Q96LD4 638 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 NEUROD6Q96NK8 337 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 SRRDQ9UH36 339 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 TNNQ9UQP3 1299 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 ZHX2Q9Y6X8 837 aa19.4■□□□□ 0.7
VAT1-205ENST00000587173 BRCA2P51587 3418 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 FMNL1O95466 1100 aaPredicted RBP19.39■□□□□ 0.69
VAT1-205ENST00000587173 GNAI2P04899 355 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 SLURP2P0DP57 97 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 OSBPP22059 807 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 HOXD10P28358 340 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 MECOMQ03112 1051 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 ATF7IPQ6VMQ6 1270 aa19.39■□□□□ 0.69
VAT1-205ENST00000587173 A0A0G2JLL6 359 aaPredicted RBP19.38■□□□□ 0.69
VAT1-205ENST00000587173 CYP2C8P10632 490 aa19.38■□□□□ 0.69
VAT1-205ENST00000587173 MAP3K10Q02779 954 aa19.38■□□□□ 0.69
VAT1-205ENST00000587173 GORABQ5T7V8 394 aa19.38■□□□□ 0.69
VAT1-205ENST00000587173 FASTKD5Q7L8L6 764 aaKnown RBP19.38■□□□□ 0.69
VAT1-205ENST00000587173 PRRT2Q7Z6L0 340 aaPredicted RBP19.38■□□□□ 0.69
VAT1-205ENST00000587173 RAET1EQ8TD07 263 aa19.38■□□□□ 0.69
VAT1-205ENST00000587173 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
VAT1-205ENST00000587173 KIAA0100Q14667 2235 aaKnown RBP19.37■□□□□ 0.69
VAT1-205ENST00000587173 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 GPR75-ASB3A0A0A6YYF3 556 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 BCAR3O75815 825 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 BCRP11274 1271 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 RHBDL3P58872 404 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 GADL1Q6ZQY3 521 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 SPATA5Q8NB90 893 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 ZNF384Q8TF68 577 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 CLUAP1Q96AJ1 413 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 AFG3L2Q9Y4W6 797 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 AK9Q5TCS8 1911 aa19.37■□□□□ 0.69
VAT1-205ENST00000587173 MYH2Q9UKX2 1941 aa19.36■□□□□ 0.69
VAT1-205ENST00000587173 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
VAT1-205ENST00000587173 CTNND1O60716 968 aaKnown RBP19.36■□□□□ 0.69
VAT1-205ENST00000587173 G3BP1Q13283 466 aaKnown RBP eCLIP19.36■□□□□ 0.696e-7■□□□□ 11
VAT1-205ENST00000587173 TBC1D9Q6ZT07 1266 aa19.36■□□□□ 0.69
VAT1-205ENST00000587173 DOCK2Q92608 1830 aa19.36■□□□□ 0.69
VAT1-205ENST00000587173 LDHCP07864 332 aa19.35■□□□□ 0.69
VAT1-205ENST00000587173 ARID4AP29374 1257 aaPredicted RBP19.35■□□□□ 0.69
VAT1-205ENST00000587173 GRK4P32298 578 aa19.35■□□□□ 0.69
VAT1-205ENST00000587173 FCGRTP55899 365 aa19.35■□□□□ 0.69
VAT1-205ENST00000587173 GSTO1P78417 241 aa19.35■□□□□ 0.69
VAT1-205ENST00000587173 MTFR1Q15390 333 aa19.35■□□□□ 0.69
VAT1-205ENST00000587173 HABP4Q5JVS0 413 aaKnown RBP19.35■□□□□ 0.69
VAT1-205ENST00000587173 NSUN4Q96CB9 384 aaKnown RBP19.35■□□□□ 0.69
VAT1-205ENST00000587173 RAI14Q9P0K7 980 aa19.35■□□□□ 0.69
VAT1-205ENST00000587173 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.35■□□□□ 0.69
VAT1-205ENST00000587173 TRIM75PA6NK02 468 aa19.34■□□□□ 0.69
VAT1-205ENST00000587173 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
VAT1-205ENST00000587173 PRKCZQ05513 592 aa19.34■□□□□ 0.69
VAT1-205ENST00000587173 ZKSCAN2Q63HK3 967 aa19.34■□□□□ 0.69
VAT1-205ENST00000587173 CCDC84Q86UT8 332 aaPredicted RBP19.34■□□□□ 0.69
VAT1-205ENST00000587173 TBC1D12O60347 775 aa19.33■□□□□ 0.68
VAT1-205ENST00000587173 MAP4K4O95819 1239 aaPredicted RBP19.33■□□□□ 0.68
VAT1-205ENST00000587173 MCAMP43121 646 aa19.33■□□□□ 0.68
VAT1-205ENST00000587173 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.33■□□□□ 0.683e-6■□□□□ 9.8
VAT1-205ENST00000587173 SLC45A1Q9Y2W3 748 aa19.33■□□□□ 0.68
VAT1-205ENST00000587173 FAM196BA6NMK8 535 aa19.32■□□□□ 0.68
VAT1-205ENST00000587173 UQCRFS1P1P0C7P4 283 aa19.32■□□□□ 0.68
VAT1-205ENST00000587173 TMEM57Q8N5G2 664 aa19.32■□□□□ 0.68
VAT1-205ENST00000587173 SHISA4Q96DD7 197 aa19.32■□□□□ 0.68
VAT1-205ENST00000587173 OSBPL5Q9H0X9 879 aaPredicted RBP19.32■□□□□ 0.68
VAT1-205ENST00000587173 LRP2BPQ9P2M1 347 aa19.32■□□□□ 0.68
VAT1-205ENST00000587173 BIN2Q9UBW5 565 aaPredicted RBP19.32■□□□□ 0.68
VAT1-205ENST00000587173 SMCR8Q8TEV9 937 aaPredicted RBP19.31■□□□□ 0.68
VAT1-205ENST00000587173 GABRQQ9UN88 632 aa19.31■□□□□ 0.68
VAT1-205ENST00000587173 AGTPBP1Q9UPW5 1226 aa19.31■□□□□ 0.68
VAT1-205ENST00000587173 COL2A1P02458 1487 aaPredicted RBP19.3■□□□□ 0.68
VAT1-205ENST00000587173 CCL5P13501 91 aa19.3■□□□□ 0.68
VAT1-205ENST00000587173 UBXN2AP68543 259 aa19.3■□□□□ 0.68
VAT1-205ENST00000587173 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
VAT1-205ENST00000587173 TEX11Q8IYF3 940 aa19.3■□□□□ 0.68
VAT1-205ENST00000587173 NKX2-3Q8TAU0 364 aa19.3■□□□□ 0.68
VAT1-205ENST00000587173 DOCK1Q14185 1865 aa19.3■□□□□ 0.68
VAT1-205ENST00000587173 OS9Q13438 667 aaPredicted RBP19.29■□□□□ 0.68
VAT1-205ENST00000587173 POLA2Q14181 598 aa19.29■□□□□ 0.68
VAT1-205ENST00000587173 TNNI3KQ59H18 835 aa19.29■□□□□ 0.68
VAT1-205ENST00000587173 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
VAT1-205ENST00000587173 SLAIN1Q8ND83 568 aa19.29■□□□□ 0.68
VAT1-205ENST00000587173 NOL10Q9BSC4 688 aaKnown RBP19.29■□□□□ 0.68
VAT1-205ENST00000587173 RNF208Q9H0X6 261 aa19.29■□□□□ 0.68
VAT1-205ENST00000587173 SNRKQ9NRH2 765 aa19.29■□□□□ 0.68
VAT1-205ENST00000587173 FPGT-TNNI3KV9GXZ4 949 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms