RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 ATN1P54259 1190 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-211ENST00000586921 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
SMARCA4-211ENST00000586921 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
SMARCA4-211ENST00000586921 NEURL1BA8MQ27 555 aa16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 CSF1RP07333 972 aa16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 GYG1P46976 350 aa16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 NEUROD2Q15784 382 aa16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 LHX8Q68G74 356 aa16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 APOBEC3HQ6NTF7 200 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 NECAB3Q96P71 396 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 AFG3L2Q9Y4W6 797 aa16.21■□□□□ 0.19
SMARCA4-211ENST00000586921 PTPRAP18433 802 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 CYP2B6P20813 491 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 RTP1P59025 263 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 CACNB2Q08289 660 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 TCP10Q12799 353 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 SCYL3Q8IZE3 742 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 FAM151AQ8WW52 585 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 BADQ92934 168 aa16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 RNPC3Q96LT9 517 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 PRDM5Q9NQX1 630 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-211ENST00000586921 PLXNB2O15031 1838 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 DNAJB2P25686 324 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 GCLCP48506 637 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 KSR2Q6VAB6 950 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 GAS2L1Q99501 681 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 ZNF576Q9H609 170 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 ATP11BQ9Y2G3 1177 aa16.19■□□□□ 0.18
SMARCA4-211ENST00000586921 TRIM75PA6NK02 468 aa16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 TMEM31Q5JXX7 168 aa16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 AKNAD1Q5T1N1 836 aa16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 TREML2Q5T2D2 321 aa16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 TRMT44Q8IYL2 757 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-211ENST00000586921 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 SOCS4Q8WXH5 440 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 FAM84BQ96KN1 310 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 NUDT12Q9BQG2 462 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 MRIQ9BWK5 157 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 CHMP3Q9Y3E7 222 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 MAST3O60307 1309 aa16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 TCF20Q9UGU0 1960 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-211ENST00000586921 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-211ENST00000586921 IQSEC3Q9UPP2 1182 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-211ENST00000586921 PHF20L1A8MW92 1017 aa16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 FRAT2O75474 233 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 GCKRQ14397 625 aa16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 EPHX3Q9H6B9 360 aa16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 CNNM1Q9NRU3 951 aa16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
SMARCA4-211ENST00000586921 MRE11P49959 708 aa16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 CASP7P55210 303 aa16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 UBE4AQ14139 1066 aa16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 CCDC85BQ15834 202 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 HHIPL2Q6UWX4 724 aa16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 LDHAL6AQ6ZMR3 332 aa16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 TIFAQ96CG3 184 aa16.14■□□□□ 0.17
SMARCA4-211ENST00000586921 XIRP2A4UGR9 3374 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 PHIPQ8WWQ0 1821 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 DNM1LO00429 736 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 NFIAQ12857 509 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 TAF7LQ5H9L4 462 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 CCDC30Q5VVM6 783 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 DOCK1Q14185 1865 aa16.13■□□□□ 0.17
SMARCA4-211ENST00000586921 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 CCL14Q16627 93 aa16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 PROCA1Q8NCQ7 364 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 PRDM12Q9H4Q4 367 aa16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 PDLIM7Q9NR12 457 aa16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 SUGT1Q9Y2Z0 365 aa16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 LRRFIP2Q9Y608 721 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 DOCK2Q92608 1830 aa16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 ATRNL1Q5VV63 1379 aa16.12■□□□□ 0.17
SMARCA4-211ENST00000586921 BMP1P13497 986 aa16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.173e-7■■■□□ 14.6
SMARCA4-211ENST00000586921 ZNF594Q96JF6 807 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 ASCC2Q9H1I8 757 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 CXXC1Q9P0U4 656 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 MORF4L1Q9UBU8 362 aa16.11■□□□□ 0.17
SMARCA4-211ENST00000586921 RLFQ13129 1914 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms