RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 SH3RF3Q8TEJ3 882 aaPredicted RBP29.29■■■□□ 2.28
ERCC2-209ENST00000586856 ZNF341Q9BYN7 854 aa29.29■■■□□ 2.28
ERCC2-209ENST00000586856 CSADQ9Y600 493 aa29.29■■■□□ 2.28
ERCC2-209ENST00000586856 NPM3O75607 178 aaKnown RBP29.28■■■□□ 2.28
ERCC2-209ENST00000586856 BAG3O95817 575 aa29.28■■■□□ 2.28
ERCC2-209ENST00000586856 CYP7A1P22680 504 aa29.28■■■□□ 2.28
ERCC2-209ENST00000586856 MAP3K12Q12852 859 aa29.28■■■□□ 2.28
ERCC2-209ENST00000586856 TTF1Q15361 905 aaPredicted RBP29.28■■■□□ 2.28
ERCC2-209ENST00000586856 SH3BP5LQ7L8J4 393 aa29.28■■■□□ 2.28
ERCC2-209ENST00000586856 ZSCAN29Q8IWY8 852 aaPredicted RBP29.28■■■□□ 2.28
ERCC2-209ENST00000586856 MAGEB6Q8N7X4 407 aa29.28■■■□□ 2.28
ERCC2-209ENST00000586856 PRDM10Q9NQV6 1147 aa29.28■■■□□ 2.28
ERCC2-209ENST00000586856 COL2A1P02458 1487 aaPredicted RBP29.28■■■□□ 2.28
ERCC2-209ENST00000586856 GOLIM4O00461 696 aa29.27■■■□□ 2.28
ERCC2-209ENST00000586856 ATP5JP18859 108 aa29.27■■■□□ 2.28
ERCC2-209ENST00000586856 SAGE1Q9NXZ1 904 aa29.27■■■□□ 2.28
ERCC2-209ENST00000586856 SUPT16HQ9Y5B9 1047 aaKnown RBP29.27■■■□□ 2.28
ERCC2-209ENST00000586856 PLCG2P16885 1265 aa29.26■■■□□ 2.27
ERCC2-209ENST00000586856 GJA5P36382 358 aa29.26■■■□□ 2.27
ERCC2-209ENST00000586856 PPP4CP60510 307 aa29.26■■■□□ 2.27
ERCC2-209ENST00000586856 SREBF2Q12772 1141 aa29.26■■■□□ 2.27
ERCC2-209ENST00000586856 BOLA2Q9H3K6 86 aa29.26■■■□□ 2.27
ERCC2-209ENST00000586856 RNF186Q9NXI6 227 aa29.26■■■□□ 2.27
ERCC2-209ENST00000586856 DDTLA6NHG4 134 aaPredicted RBP29.25■■■□□ 2.27
ERCC2-209ENST00000586856 AAMPQ13685 434 aa29.25■■■□□ 2.27
ERCC2-209ENST00000586856 IFFO2Q5TF58 517 aa29.25■■■□□ 2.27
ERCC2-209ENST00000586856 OPTNQ96CV9 577 aa29.25■■■□□ 2.27
ERCC2-209ENST00000586856 EDC3Q96F86 508 aaKnown RBP29.25■■■□□ 2.27
ERCC2-209ENST00000586856 SNCAIPQ9Y6H5 919 aa29.25■■■□□ 2.27
ERCC2-209ENST00000586856 MYH7P12883 1935 aa29.24■■■□□ 2.27
ERCC2-209ENST00000586856 TMED8Q6PL24 325 aaPredicted RBP29.24■■■□□ 2.27
ERCC2-209ENST00000586856 CNKSR2Q8WXI2 1034 aa29.24■■■□□ 2.27
ERCC2-209ENST00000586856 ZKSCAN4Q969J2 545 aaPredicted RBP29.24■■■□□ 2.27
ERCC2-209ENST00000586856 HAUS7Q99871 368 aa29.24■■■□□ 2.27
ERCC2-209ENST00000586856 OSBPL5Q9H0X9 879 aaPredicted RBP29.24■■■□□ 2.27
ERCC2-209ENST00000586856 MANSC4A6NHS7 340 aaPredicted RBP29.23■■■□□ 2.27
ERCC2-209ENST00000586856 TRPA1O75762 1119 aa29.23■■■□□ 2.27
ERCC2-209ENST00000586856 INPP5BP32019 993 aa29.23■■■□□ 2.27
ERCC2-209ENST00000586856 TM4SF4P48230 202 aa29.23■■■□□ 2.27
ERCC2-209ENST00000586856 HDAC1Q13547 482 aaPredicted RBP29.23■■■□□ 2.27
ERCC2-209ENST00000586856 MIGA1Q8NAN2 632 aa29.23■■■□□ 2.27
ERCC2-209ENST00000586856 ECHDC1Q9NTX5 307 aa29.23■■■□□ 2.27
ERCC2-209ENST00000586856 PAG1Q9NWQ8 432 aa29.23■■■□□ 2.27
ERCC2-209ENST00000586856 DYNLL1P63167 89 aaKnown RBP29.22■■■□□ 2.27
ERCC2-209ENST00000586856 EXOC6Q8TAG9 804 aa29.22■■■□□ 2.27
ERCC2-209ENST00000586856 ZNF112Q9UJU3 913 aa29.22■■■□□ 2.27
ERCC2-209ENST00000586856 SIPA1L1O43166 1804 aa29.22■■■□□ 2.27
ERCC2-209ENST00000586856 SPDYE5A6NIY4 337 aa29.21■■■□□ 2.27
ERCC2-209ENST00000586856 PDE6AP16499 860 aa29.21■■■□□ 2.27
ERCC2-209ENST00000586856 OTUD5Q96G74 571 aa29.21■■■□□ 2.27
ERCC2-209ENST00000586856 GPATCH3Q96I76 525 aa29.21■■■□□ 2.27
ERCC2-209ENST00000586856 FLT1P17948 1338 aa29.2■■■□□ 2.27
ERCC2-209ENST00000586856 DOCK1Q14185 1865 aa29.2■■■□□ 2.26
ERCC2-209ENST00000586856 SLC9C2Q5TAH2 1124 aa29.19■■■□□ 2.26
ERCC2-209ENST00000586856 ERO1BQ86YB8 467 aa29.19■■■□□ 2.26
ERCC2-209ENST00000586856 CERS3Q8IU89 383 aa29.19■■■□□ 2.26
ERCC2-209ENST00000586856 MAPKAPK5Q8IW41 473 aa29.19■■■□□ 2.26
ERCC2-209ENST00000586856 TGFBRAP1Q8WUH2 860 aa29.19■■■□□ 2.26
ERCC2-209ENST00000586856 CASP8AP2Q9UKL3 1982 aa29.19■■■□□ 2.26
ERCC2-209ENST00000586856 SLURP2P0DP57 97 aa29.18■■■□□ 2.26
ERCC2-209ENST00000586856 TSHZ3Q63HK5 1081 aa29.18■■■□□ 2.26
ERCC2-209ENST00000586856 MYH1P12882 1939 aa29.18■■■□□ 2.26
ERCC2-209ENST00000586856 PHF20L1A8MW92 1017 aa29.17■■■□□ 2.26
ERCC2-209ENST00000586856 MAP3K10Q02779 954 aa29.17■■■□□ 2.26
ERCC2-209ENST00000586856 NOL9Q5SY16 702 aaKnown RBP29.17■■■□□ 2.26
ERCC2-209ENST00000586856 ZNF532Q9HCE3 1301 aa29.17■■■□□ 2.26
ERCC2-209ENST00000586856 DDX60LQ5H9U9 1706 aaKnown RBP29.17■■■□□ 2.26
ERCC2-209ENST00000586856 NAV1Q8NEY1 1877 aa29.17■■■□□ 2.26
ERCC2-209ENST00000586856 INHBEP58166 350 aa29.16■■■□□ 2.26
ERCC2-209ENST00000586856 IFNL1Q8IU54 200 aa29.16■■■□□ 2.26
ERCC2-209ENST00000586856 GCC1Q96CN9 775 aa29.16■■■□□ 2.26
ERCC2-209ENST00000586856 RIOK1Q9BRS2 568 aaKnown RBP29.16■■■□□ 2.26
ERCC2-209ENST00000586856 TCRBV5S4A2TA0A5A2 114 aa29.15■■■□□ 2.26
ERCC2-209ENST00000586856 FAM196BA6NMK8 535 aa29.15■■■□□ 2.26
ERCC2-209ENST00000586856 IGF2BP3O00425 579 aaKnown RBP eCLIP29.15■■■□□ 2.26
ERCC2-209ENST00000586856 OTUD7AQ8TE49 926 aaPredicted RBP29.15■■■□□ 2.26
ERCC2-209ENST00000586856 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.15■■■□□ 2.262e-6■■■■□ 19.9
ERCC2-209ENST00000586856 MAGEB6P1A0A0J9YX57 407 aa29.14■■■□□ 2.26
ERCC2-209ENST00000586856 TBC1D12O60347 775 aa29.14■■■□□ 2.26
ERCC2-209ENST00000586856 PPIL2Q13356 520 aa29.14■■■□□ 2.26
ERCC2-209ENST00000586856 TNS4Q8IZW8 715 aa29.14■■■□□ 2.26
ERCC2-209ENST00000586856 MS4A4AQ96JQ5 239 aa29.14■■■□□ 2.26
ERCC2-209ENST00000586856 DHX36Q9H2U1 1008 aaKnown RBP29.14■■■□□ 2.26
ERCC2-209ENST00000586856 ATAD5Q96QE3 1844 aa29.14■■■□□ 2.26
ERCC2-209ENST00000586856 TESPA1A2RU30 521 aaPredicted RBP29.13■■■□□ 2.25
ERCC2-209ENST00000586856 ADD2P35612 726 aa29.13■■■□□ 2.25
ERCC2-209ENST00000586856 GTF2A2P52657 109 aa29.13■■■□□ 2.25
ERCC2-209ENST00000586856 PPATQ06203 517 aa29.13■■■□□ 2.25
ERCC2-209ENST00000586856 ANKRD45Q5TZF3 282 aa29.13■■■□□ 2.25
ERCC2-209ENST00000586856 SCYL3Q8IZE3 742 aa29.13■■■□□ 2.25
ERCC2-209ENST00000586856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.13■■■□□ 2.25
ERCC2-209ENST00000586856 ZBTB47Q9UFB7 747 aaPredicted RBP29.13■■■□□ 2.25
ERCC2-209ENST00000586856 TTC41PQ6P2S7 1318 aa29.13■■■□□ 2.25
ERCC2-209ENST00000586856 CCL15-CCL14A0A0B4J2E2 113 aa29.12■■■□□ 2.25
ERCC2-209ENST00000586856 IRF6O14896 467 aa29.12■■■□□ 2.25
ERCC2-209ENST00000586856 TBC1D8O95759 1140 aa29.12■■■□□ 2.25
ERCC2-209ENST00000586856 ALDH1A1P00352 501 aa29.12■■■□□ 2.25
ERCC2-209ENST00000586856 USP5P45974 858 aa29.12■■■□□ 2.25
ERCC2-209ENST00000586856 CCL15Q16663 113 aa29.12■■■□□ 2.25
ERCC2-209ENST00000586856 BRI3BPQ8WY22 251 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms