RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MROH7-TTC4A0A0A0MT08 1334 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 CXCL11O14625 94 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 ECM2O94769 699 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-216ENST00000586813 TRIM27P14373 513 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 CTGFP29279 349 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 BTDP43251 543 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 SLC4A8Q2Y0W8 1093 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 ZSCAN29Q8IWY8 852 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-216ENST00000586813 SCYL3Q8IZE3 742 aa23.95■■□□□ 1.42
TRAF4-216ENST00000586813 ATAD5Q96QE3 1844 aa23.94■■□□□ 1.42
TRAF4-216ENST00000586813 MYCP01106 439 aaPredicted RBP23.94■■□□□ 1.42
TRAF4-216ENST00000586813 GCC1Q96CN9 775 aa23.94■■□□□ 1.42
TRAF4-216ENST00000586813 PARK7Q99497 189 aaKnown RBP23.94■■□□□ 1.42
TRAF4-216ENST00000586813 DDX4Q9NQI0 724 aaKnown RBP23.94■■□□□ 1.42
TRAF4-216ENST00000586813 PICK1Q9NRD5 415 aa23.94■■□□□ 1.42
TRAF4-216ENST00000586813 PCDH10Q9P2E7 1040 aa23.94■■□□□ 1.42
TRAF4-216ENST00000586813 MAST2Q6P0Q8 1798 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 DDTLA6NHG4 134 aaPredicted RBP23.93■■□□□ 1.42
TRAF4-216ENST00000586813 IPO8O15397 1037 aaKnown RBP23.93■■□□□ 1.42
TRAF4-216ENST00000586813 PSMC4P43686 418 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 MECOMQ03112 1051 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 PICALMQ13492 652 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 GPAT2Q6NUI2 795 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 TRIM47Q96LD4 638 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 NEUROD6Q96NK8 337 aa23.93■■□□□ 1.42
TRAF4-216ENST00000586813 MAP3K10Q02779 954 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 ATF7IPQ6VMQ6 1270 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 ERICH6Q7L0X2 663 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 ZNF384Q8TF68 577 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 SRRDQ9UH36 339 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 TNNQ9UQP3 1299 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 ZHX2Q9Y6X8 837 aa23.92■■□□□ 1.42
TRAF4-216ENST00000586813 GPR75-ASB3A0A0A6YYF3 556 aa23.91■■□□□ 1.42
TRAF4-216ENST00000586813 A0A0G2JLL6 359 aaPredicted RBP23.91■■□□□ 1.42
TRAF4-216ENST00000586813 GNAI2P04899 355 aa23.91■■□□□ 1.42
TRAF4-216ENST00000586813 PTPRAP18433 802 aa23.91■■□□□ 1.42
TRAF4-216ENST00000586813 OSBPP22059 807 aa23.91■■□□□ 1.42
TRAF4-216ENST00000586813 PRRT2Q7Z6L0 340 aaPredicted RBP23.91■■□□□ 1.42
TRAF4-216ENST00000586813 FRAT1Q92837 279 aaPredicted RBP23.91■■□□□ 1.42
TRAF4-216ENST00000586813 HMG20BQ9P0W2 317 aa23.91■■□□□ 1.42
TRAF4-216ENST00000586813 PNMA6EA0A0J9YXQ4 647 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 BCAR3O75815 825 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 FMNL1O95466 1100 aaPredicted RBP23.9■■□□□ 1.42
TRAF4-216ENST00000586813 SLURP2P0DP57 97 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 CYP2C8P10632 490 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 RHBDL3P58872 404 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 PI16Q6UXB8 463 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 FASTKD5Q7L8L6 764 aaKnown RBP23.9■■□□□ 1.42
TRAF4-216ENST00000586813 SPATA5Q8NB90 893 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 AFG3L2Q9Y4W6 797 aa23.9■■□□□ 1.42
TRAF4-216ENST00000586813 MYPNQ86TC9 1320 aa23.89■■□□□ 1.42
TRAF4-216ENST00000586813 COL2A1P02458 1487 aaPredicted RBP23.89■■□□□ 1.42
TRAF4-216ENST00000586813 LOC285556D6RIA3 1793 aa23.89■■□□□ 1.42
TRAF4-216ENST00000586813 BCRP11274 1271 aa23.89■■□□□ 1.41
TRAF4-216ENST00000586813 HOXD10P28358 340 aa23.89■■□□□ 1.41
TRAF4-216ENST00000586813 GORABQ5T7V8 394 aa23.89■■□□□ 1.41
TRAF4-216ENST00000586813 CDK5RAP2Q96SN8 1893 aa23.89■■□□□ 1.41
TRAF4-216ENST00000586813 CTNND1O60716 968 aaKnown RBP23.88■■□□□ 1.41
TRAF4-216ENST00000586813 ARID4AP29374 1257 aaPredicted RBP23.88■■□□□ 1.41
TRAF4-216ENST00000586813 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
TRAF4-216ENST00000586813 NSUN4Q96CB9 384 aaKnown RBP23.88■■□□□ 1.41
TRAF4-216ENST00000586813 NPM3O75607 178 aaKnown RBP23.87■■□□□ 1.41
TRAF4-216ENST00000586813 GSTO1P78417 241 aa23.87■■□□□ 1.41
TRAF4-216ENST00000586813 GADL1Q6ZQY3 521 aa23.87■■□□□ 1.41
TRAF4-216ENST00000586813 TBC1D9Q6ZT07 1266 aa23.87■■□□□ 1.41
TRAF4-216ENST00000586813 RAET1EQ8TD07 263 aa23.87■■□□□ 1.41
TRAF4-216ENST00000586813 FOCADQ5VW36 1801 aa23.87■■□□□ 1.41
TRAF4-216ENST00000586813 MYO5AQ9Y4I1 1855 aaKnown RBP23.86■■□□□ 1.41
TRAF4-216ENST00000586813 FCGRTP55899 365 aa23.86■■□□□ 1.41
TRAF4-216ENST00000586813 G3BP1Q13283 466 aaKnown RBP eCLIP23.86■■□□□ 1.41
TRAF4-216ENST00000586813 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.86■■□□□ 1.41
TRAF4-216ENST00000586813 SLC45A1Q9Y2W3 748 aa23.86■■□□□ 1.41
TRAF4-216ENST00000586813 SIPA1L1O43166 1804 aa23.86■■□□□ 1.41
TRAF4-216ENST00000586813 TBC1D12O60347 775 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 MAP4K4O95819 1239 aaPredicted RBP23.85■■□□□ 1.41
TRAF4-216ENST00000586813 LDHCP07864 332 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 GRK4P32298 578 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 MCAMP43121 646 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 PRKCZQ05513 592 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 MTFR1Q15390 333 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 HABP4Q5JVS0 413 aaKnown RBP23.85■■□□□ 1.41
TRAF4-216ENST00000586813 RAI14Q9P0K7 980 aa23.85■■□□□ 1.41
TRAF4-216ENST00000586813 TRIM75PA6NK02 468 aa23.84■■□□□ 1.41
TRAF4-216ENST00000586813 FAM196BA6NMK8 535 aa23.84■■□□□ 1.41
TRAF4-216ENST00000586813 TMEM57Q8N5G2 664 aa23.84■■□□□ 1.41
TRAF4-216ENST00000586813 UQCRFS1P1P0C7P4 283 aa23.83■■□□□ 1.41
TRAF4-216ENST00000586813 CCDC84Q86UT8 332 aaPredicted RBP23.83■■□□□ 1.41
TRAF4-216ENST00000586813 SHISA4Q96DD7 197 aa23.83■■□□□ 1.41
TRAF4-216ENST00000586813 OSBPL5Q9H0X9 879 aaPredicted RBP23.83■■□□□ 1.41
TRAF4-216ENST00000586813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRAF4-216ENST00000586813 ZKSCAN2Q63HK3 967 aa23.82■■□□□ 1.4
TRAF4-216ENST00000586813 SMCR8Q8TEV9 937 aaPredicted RBP23.82■■□□□ 1.4
TRAF4-216ENST00000586813 AGTPBP1Q9UPW5 1226 aa23.82■■□□□ 1.4
TRAF4-216ENST00000586813 POLA2Q14181 598 aa23.81■■□□□ 1.4
TRAF4-216ENST00000586813 LRP2BPQ9P2M1 347 aa23.81■■□□□ 1.4
TRAF4-216ENST00000586813 GABRQQ9UN88 632 aa23.81■■□□□ 1.4
TRAF4-216ENST00000586813 CCL5P13501 91 aa23.8■■□□□ 1.4
TRAF4-216ENST00000586813 TEX11Q8IYF3 940 aa23.8■■□□□ 1.4
TRAF4-216ENST00000586813 SLAIN1Q8ND83 568 aa23.8■■□□□ 1.4
TRAF4-216ENST00000586813 GPR108Q9NPR9 543 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms