RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	NEUROD6	Q96NK8	337 aa		20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PCDH10	Q9P2E7	1040 aa		20.26	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	GPR75-ASB3	A0A0A6YYF3	556 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	IPO8	O15397	1037 aa	Known RBP	20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	BCAR3	O75815	825 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	TRIM27	P14373	513 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PTPRA	P18433	802 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	BTD	P43251	543 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	MECOM	Q03112	1051 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	MVP	Q14764	893 aa	Known RBP	20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	SCYL3	Q8IZE3	742 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	HMG20B	Q9P0W2	317 aa		20.25	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	RHBDL3	P58872	404 aa		20.24	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	ERICH6	Q7L0X2	663 aa		20.24	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PICK1	Q9NRD5	415 aa		20.24	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	SRRD	Q9UH36	339 aa		20.24	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	AFG3L2	Q9Y4W6	797 aa		20.24	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PNMA6E	A0A0J9YXQ4	647 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	FMNL1	O95466	1100 aa	Predicted RBP	20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	GNAI2	P04899	355 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	CYP2C8	P10632	490 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	OSBP	P22059	807 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	CENPF	P49454	3210 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PICALM	Q13492	652 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	ATF7IP	Q6VMQ6	1270 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	TBC1D9	Q6ZT07	1266 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	FRAT1	Q92837	279 aa	Predicted RBP	20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	MROH7-TTC4	A0A0A0MT08	1334 aa		20.23	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	RFX7	Q2KHR2	1363 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460		A0A0G2JLL6	359 aa	Predicted RBP	20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	CTNND1	O60716	968 aa	Known RBP	20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	BCR	P11274	1271 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	HOXD10	P28358	340 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PI16	Q6UXB8	463 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	FASTKD5	Q7L8L6	764 aa	Known RBP	20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PRRT2	Q7Z6L0	340 aa	Predicted RBP	20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	SPATA5	Q8NB90	893 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	CLUAP1	Q96AJ1	413 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	GCC1	Q96CN9	775 aa		20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	MKI67	P46013	3256 aa	Known RBP	20.22	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	G3BP1	Q13283	466 aa	Known RBP eCLIP	20.21	■□□□□ 0.83	2e-8	■□□□□ 10.9
PRKAR1A-206	ENST00000585460	MTFR1	Q15390	333 aa		20.21	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	GORAB	Q5T7V8	394 aa		20.21	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	NSUN4	Q96CB9	384 aa	Known RBP	20.21	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	PARK7	Q99497	189 aa	Known RBP	20.21	■□□□□ 0.83
PRKAR1A-206	ENST00000585460	TBC1D12	O60347	775 aa		20.2	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	NPM3	O75607	178 aa	Known RBP	20.2	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	LDHC	P07864	332 aa		20.2	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	HABP4	Q5JVS0	413 aa	Known RBP	20.2	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	ARID4A	P29374	1257 aa	Predicted RBP	20.19	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	GRK4	P32298	578 aa		20.19	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	GADL1	Q6ZQY3	521 aa		20.19	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	RAET1E	Q8TD07	263 aa		20.19	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	20.19	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	MAP4K4	O95819	1239 aa	Predicted RBP	20.18	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	GSTO1	P78417	241 aa		20.18	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	CCDC84	Q86UT8	332 aa	Predicted RBP	20.18	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	RAI14	Q9P0K7	980 aa		20.18	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	SLC45A1	Q9Y2W3	748 aa		20.18	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	TRIM75P	A6NK02	468 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	MCAM	P43121	646 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	FCGRT	P55899	365 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	PRKCZ	Q05513	592 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	TMEM57	Q8N5G2	664 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	20.17	■□□□□ 0.82	2e-6	■■■■■ 35.2
PRKAR1A-206	ENST00000585460	GABRQ	Q9UN88	632 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	MYPN	Q86TC9	1320 aa		20.17	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	FAM196B	A6NMK8	535 aa		20.16	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	UQCRFS1P1	P0C7P4	283 aa		20.16	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	LRP2BP	Q9P2M1	347 aa		20.16	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	ATP8B2	P98198	1209 aa		20.15	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	POLA2	Q14181	598 aa		20.15	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	RRP1B	Q14684	758 aa	Known RBP	20.15	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	SHISA4	Q96DD7	197 aa		20.15	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	BRCA2	P51587	3418 aa		20.15	■□□□□ 0.82
PRKAR1A-206	ENST00000585460	CCL5	P13501	91 aa		20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ZKSCAN2	Q63HK3	967 aa		20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SSH3	Q8TE77	659 aa		20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	OSBPL5	Q9H0X9	879 aa	Predicted RBP	20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	GPR108	Q9NPR9	543 aa		20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SNRK	Q9NRH2	765 aa		20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	BIN2	Q9UBW5	565 aa	Predicted RBP	20.14	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	GJB1	P08034	283 aa		20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SPP2	Q13103	211 aa		20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TREML2	Q5T2D2	321 aa		20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TEX11	Q8IYF3	940 aa		20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	AGTPBP1	Q9UPW5	1226 aa		20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	ZSWIM8	A7E2V4	1837 aa		20.13	■□□□□ 0.81
PRKAR1A-206	ENST00000585460		H0YGN5	161 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	CAP2	P40123	477 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	GJA8	P48165	433 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	FLT3LG	P49771	235 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	TNNI3K	Q59H18	835 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	NKX2-3	Q8TAU0	364 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	DBNDD2	Q9BQY9	259 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	RNF208	Q9H0X6	261 aa		20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	COLQ	Q9Y215	455 aa	Predicted RBP	20.12	■□□□□ 0.81
PRKAR1A-206	ENST00000585460	FPGT-TNNI3K	V9GXZ4	949 aa		20.12	■□□□□ 0.81

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