RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 DSCC1Q9BVC3 393 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 NYXQ9GZU5 481 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 CABP5Q9NP86 173 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 PATL2C9JE40 543 aaKnown RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 MSNP26038 577 aaKnown RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 SHROOM1Q2M3G4 852 aaPredicted RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 AKNAD1Q5T1N1 836 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 GRAMD1CQ8IYS0 662 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
RFFL-212ENST00000584655 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
RFFL-212ENST00000584655 BECN2A8MW95 431 aa11.96□□□□□ -0.5
RFFL-212ENST00000584655 RTN1Q16799 776 aa11.96□□□□□ -0.5
RFFL-212ENST00000584655 TEX11Q8IYF3 940 aa11.96□□□□□ -0.5
RFFL-212ENST00000584655 INTS4Q96HW7 963 aaKnown RBP11.96□□□□□ -0.5
RFFL-212ENST00000584655 CEP350Q5VT06 3117 aa11.96□□□□□ -0.5
RFFL-212ENST00000584655 KIF28PB7ZC32 967 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 APOA5Q6Q788 366 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 CARMIL3Q8ND23 1372 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 PARP3Q9Y6F1 533 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 AFMP43652 599 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 TRIM5Q9C035 493 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 VEZTQ9HBM0 779 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 ZBTB12Q9Y330 459 aaPredicted RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 KINO60870 393 aaKnown RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 PLCD1P51178 756 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 ZNF174Q15697 407 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 GPCPD1Q9NPB8 672 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 HSP90AA2PQ14568 343 aaPredicted RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 ANO6Q4KMQ2 910 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 ZNF444Q8N0Y2 327 aaPredicted RBP11.95□□□□□ -0.5
RFFL-212ENST00000584655 POLLQ9UGP5 575 aa11.95□□□□□ -0.5
RFFL-212ENST00000584655 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 FDPSP14324 419 aaKnown RBP11.94□□□□□ -0.5
RFFL-212ENST00000584655 KRT40Q6A162 431 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 TMX1Q9H3N1 280 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 TAF1P21675 1872 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 RBAK-RBAKDNI3L0D1 243 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 MBD3O95983 291 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 BTDP43251 543 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 SSRP1Q08945 709 aaKnown RBP11.94□□□□□ -0.5
RFFL-212ENST00000584655 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 IQCA1Q86XH1 822 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
RFFL-212ENST00000584655 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 KCPQ6ZWJ8 1503 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
RFFL-212ENST00000584655 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 ZNF592Q92610 1267 aa11.94□□□□□ -0.5
RFFL-212ENST00000584655 SLC16A2P36021 539 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 UBE2HP62256 183 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 C2CD5Q86YS7 1000 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
RFFL-212ENST00000584655 TM6SF1Q9BZW5 370 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 PRAMEF18Q5VWM3 479 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 HMGB1P09429 215 aaKnown RBP11.93□□□□□ -0.5
RFFL-212ENST00000584655 FGFR2P21802 821 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 POLD4Q9HCU8 107 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 GPR108Q9NPR9 543 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 FZD1Q9UP38 647 aa11.93□□□□□ -0.5
RFFL-212ENST00000584655 PHRF1Q9P1Y6 1649 aaKnown RBP11.93□□□□□ -0.5
RFFL-212ENST00000584655 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.5
RFFL-212ENST00000584655 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 ZNF654Q8IZM8 581 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 CRACR2BQ8N4Y2 399 aaPredicted RBP11.92□□□□□ -0.5
RFFL-212ENST00000584655 ESR2Q92731 530 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 MRC1P22897 1456 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 GRIN1Q05586 938 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 AOC3Q16853 763 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
RFFL-212ENST00000584655 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 ADCY5O95622 1261 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 MCM7P33993 719 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 NLRP5P59047 1200 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 RBM10P98175 930 aaKnown RBP11.92□□□□□ -0.5
RFFL-212ENST00000584655 MAP3K11Q16584 847 aa11.92□□□□□ -0.5
RFFL-212ENST00000584655 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms