RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	TBC1D9B	Q66K14	1250 aa		10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	OGFOD1	Q8N543	542 aa		10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	MASTL	Q96GX5	879 aa		10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	ZNF594	Q96JF6	807 aa	Predicted RBP	10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	HHIPL1	Q96JK4	782 aa		10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	DNAAF2	Q9NVR5	837 aa	Known RBP	10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	KIAA1024	Q9UPX6	916 aa		10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	USP3	Q9Y6I4	520 aa		10.58	□□□□□ -0.72
NCOR1-223	ENST00000583226	ARFGEF2	Q9Y6D5	1785 aa		10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226		A0A087WZG4	1122 aa		10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	EIF5	P55010	431 aa	Known RBP	10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	CLDN10	P78369	228 aa		10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	GAS6	Q14393	721 aa		10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	CCDC102B	Q68D86	513 aa		10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	TRPM7	Q96QT4	1865 aa		10.57	□□□□□ -0.72
NCOR1-223	ENST00000583226	PALM3	A6NDB9	673 aa	Predicted RBP	10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	SOX10	P56693	466 aa		10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	FMR1	Q06787	632 aa	Known RBP eCLIP	10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	SAPCD2	Q86UD0	394 aa		10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	SVOP	Q8N4V2	548 aa		10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	CNBD1	Q8NA66	436 aa		10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	RBM19	Q9Y4C8	960 aa	Known RBP	10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.56	□□□□□ -0.72
NCOR1-223	ENST00000583226	CUL9	Q8IWT3	2517 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	CDK2AP1	O14519	115 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	CANX	P27824	592 aa	Known RBP	10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	CDCA8	Q53HL2	280 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	EFHC2	Q5JST6	749 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	TBCEL	Q5QJ74	424 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	RTKN2	Q8IZC4	609 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	PPP1R12C	Q9BZL4	782 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	SLC52A2	Q9HAB3	445 aa		10.55	□□□□□ -0.72
NCOR1-223	ENST00000583226	SCN11A	Q9UI33	1791 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	TRAF5	O00463	557 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	ZBTB7B	O15156	539 aa	Predicted RBP	10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	STARD3NL	O95772	234 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	RASA1	P20936	1047 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	LMOD1	P29536	600 aa	Predicted RBP	10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	IARS	P41252	1262 aa	Known RBP	10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	ST5	P78524	1137 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	MTFR1	Q15390	333 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	USP50	Q70EL3	339 aa	Predicted RBP	10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	GCC1	Q96CN9	775 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	SETDB2	Q96T68	719 aa		10.54	□□□□□ -0.72
NCOR1-223	ENST00000583226	CACNA1S	Q13698	1873 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	NPHP1	O15259	732 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	THBS1	P07996	1170 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	NPR1	P16066	1061 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	SLC39A6	Q13433	755 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	CIAPIN1	Q6FI81	312 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	WHAMM	Q8TF30	809 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	MBIP	Q9NS73	344 aa		10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.53	□□□□□ -0.72
NCOR1-223	ENST00000583226	KLRG2	A4D1S0	409 aa	Predicted RBP	10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	SFI1	A8K8P3	1242 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	MX2	P20592	715 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	EPS15	P42566	896 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	NOG	Q13253	232 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	AKAP4	Q5JQC9	854 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	AEBP1	Q8IUX7	1158 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	JDP2	Q8WYK2	163 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	ZNF232	Q9UNY5	417 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	MRC1	P22897	1456 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	SCN7A	Q01118	1682 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226		A0A0C4DFX4	3053 aa		10.52	□□□□□ -0.73
NCOR1-223	ENST00000583226	CELF2	O95319	508 aa	Known RBP	10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	EIF6	P56537	245 aa	Known RBP	10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	SRSF11	Q05519	484 aa	Known RBP	10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	SLC9A9	Q8IVB4	645 aa		10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	SYNE4	Q8N205	404 aa		10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	LARGE2	Q8N3Y3	721 aa		10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	PSMD1	Q99460	953 aa		10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	LGR6	Q9HBX8	967 aa		10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	SAGE1	Q9NXZ1	904 aa		10.51	□□□□□ -0.73
NCOR1-223	ENST00000583226	SLURP2	P0DP57	97 aa		10.5	□□□□□ -0.73
NCOR1-223	ENST00000583226	ATP4A	P20648	1035 aa		10.5	□□□□□ -0.73
NCOR1-223	ENST00000583226	IL6ST	P40189	918 aa	Predicted RBP	10.5	□□□□□ -0.73
NCOR1-223	ENST00000583226	ZNF385C	Q66K41	422 aa	Predicted RBP	10.5	□□□□□ -0.73
NCOR1-223	ENST00000583226	OLFM4	Q6UX06	510 aa		10.5	□□□□□ -0.73
NCOR1-223	ENST00000583226	GJA3	Q9Y6H8	435 aa		10.5	□□□□□ -0.73
NCOR1-223	ENST00000583226	RNMT	O43148	476 aa	Known RBP	10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	CAMTA2	O94983	1202 aa		10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	TNNT2	P45379	298 aa	Predicted RBP	10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	TSEN2	Q8NCE0	465 aa	Known RBP	10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	PHF24	Q9UPV7	400 aa		10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	GTF3C3	Q9Y5Q9	886 aa		10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	MKI67	P46013	3256 aa	Known RBP	10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	BCOR	Q6W2J9	1755 aa		10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	SNED1	Q8TER0	1413 aa		10.49	□□□□□ -0.73
NCOR1-223	ENST00000583226	UBR2	Q8IWV8	1755 aa		10.48	□□□□□ -0.73
NCOR1-223	ENST00000583226	ALDH1B1	P30837	517 aa		10.48	□□□□□ -0.73
NCOR1-223	ENST00000583226	LBR	Q14739	615 aa	Known RBP	10.48	□□□□□ -0.73
NCOR1-223	ENST00000583226	HABP4	Q5JVS0	413 aa	Known RBP	10.48	□□□□□ -0.73
NCOR1-223	ENST00000583226	SULT6B1	Q6IMI4	303 aa		10.48	□□□□□ -0.73
NCOR1-223	ENST00000583226	LYPD4	Q6UWN0	246 aa		10.48	□□□□□ -0.73
NCOR1-223	ENST00000583226	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms