RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 COL19A1Q14993 1142 aa7.5□□□□□ -1.21
COPS3-217ENST00000583160 MSMPQ1L6U9 139 aa7.5□□□□□ -1.21
COPS3-217ENST00000583160 EAPPQ56P03 285 aaPredicted RBP7.5□□□□□ -1.21
COPS3-217ENST00000583160 OGFOD3Q6PK18 319 aa7.5□□□□□ -1.21
COPS3-217ENST00000583160 CACNA2D2Q9NY47 1150 aa7.5□□□□□ -1.21
COPS3-217ENST00000583160 EIF4BP23588 611 aaKnown RBP7.49□□□□□ -1.21
COPS3-217ENST00000583160 GNA15P30679 374 aa7.49□□□□□ -1.21
COPS3-217ENST00000583160 ERVK-24P63145 666 aa7.49□□□□□ -1.21
COPS3-217ENST00000583160 LRRC14Q15048 493 aa7.49□□□□□ -1.21
COPS3-217ENST00000583160 LRRC4CQ9HCJ2 640 aa7.49□□□□□ -1.21
COPS3-217ENST00000583160 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
COPS3-217ENST00000583160 OAS3Q9Y6K5 1087 aaKnown RBP7.49□□□□□ -1.21
COPS3-217ENST00000583160 TRIM37O94972 964 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 CELA3AP09093 270 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 FGD1P98174 961 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 CDK5R2Q13319 367 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 RASIP1Q5U651 963 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 LLGL2Q6P1M3 1020 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 RNF214Q8ND24 703 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 DUSP9Q99956 384 aaKnown RBP7.48□□□□□ -1.21
COPS3-217ENST00000583160 SSU72Q9NP77 194 aaKnown RBP7.48□□□□□ -1.21
COPS3-217ENST00000583160 RNF19AQ9NV58 838 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 CYP8B1Q9UNU6 501 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 TTF2Q9UNY4 1162 aaKnown RBP7.48□□□□□ -1.21
COPS3-217ENST00000583160 CSADQ9Y600 493 aa7.48□□□□□ -1.21
COPS3-217ENST00000583160 NEFMP07197 916 aa7.47□□□□□ -1.21
COPS3-217ENST00000583160 PCNX4Q63HM2 1172 aa7.47□□□□□ -1.21
COPS3-217ENST00000583160 ISL2Q96A47 359 aa7.47□□□□□ -1.21
COPS3-217ENST00000583160 ZC3H7BQ9UGR2 993 aaKnown RBP7.47□□□□□ -1.21
COPS3-217ENST00000583160 AK5Q9Y6K8 562 aa7.47□□□□□ -1.21
COPS3-217ENST00000583160 DCDC2CA8MYV0 355 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 FAM87AP0C7U9 286 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 CYP27C1Q4G0S4 372 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 PPM1JQ5JR12 505 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 C12orf40Q86WS4 652 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 CCDC39Q9UFE4 941 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
COPS3-217ENST00000583160 ANGEL1Q9UNK9 670 aaKnown RBP7.46□□□□□ -1.22
COPS3-217ENST00000583160 DNAJC14Q6Y2X3 702 aaPredicted RBP7.45□□□□□ -1.22
COPS3-217ENST00000583160 NPAS4Q8IUM7 802 aa7.45□□□□□ -1.22
COPS3-217ENST00000583160 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.45□□□□□ -1.22
COPS3-217ENST00000583160 PSMG3-AS1Q96PY0 264 aa7.45□□□□□ -1.22
COPS3-217ENST00000583160 BSDC1Q9NW68 430 aaPredicted RBP7.45□□□□□ -1.22
COPS3-217ENST00000583160 PRNPP04156 253 aa7.44□□□□□ -1.22
COPS3-217ENST00000583160 IRAK1P51617 712 aa7.44□□□□□ -1.22
COPS3-217ENST00000583160 SCARA3Q6AZY7 606 aa7.44□□□□□ -1.22
COPS3-217ENST00000583160 PICK1Q9NRD5 415 aa7.44□□□□□ -1.22
COPS3-217ENST00000583160 LEFTY1O75610 366 aa7.43□□□□□ -1.22
COPS3-217ENST00000583160 RING1Q06587 406 aa7.43□□□□□ -1.22
COPS3-217ENST00000583160 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
COPS3-217ENST00000583160 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
COPS3-217ENST00000583160 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
COPS3-217ENST00000583160 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
COPS3-217ENST00000583160 NTF4P34130 210 aa7.42□□□□□ -1.22
COPS3-217ENST00000583160 PTPN11Q06124 597 aaPredicted RBP7.42□□□□□ -1.22
COPS3-217ENST00000583160 INPP5AQ14642 412 aa7.42□□□□□ -1.22
COPS3-217ENST00000583160 CCDC85BQ15834 202 aaPredicted RBP7.42□□□□□ -1.22
COPS3-217ENST00000583160 MCTP1Q6DN14 999 aa7.42□□□□□ -1.22
COPS3-217ENST00000583160 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
COPS3-217ENST00000583160 DUSP23Q9BVJ7 150 aa7.42□□□□□ -1.22
COPS3-217ENST00000583160 COL17A1Q9UMD9 1497 aaPredicted RBP7.42□□□□□ -1.22
COPS3-217ENST00000583160 FANCGO15287 622 aa7.41□□□□□ -1.22
COPS3-217ENST00000583160 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
COPS3-217ENST00000583160 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
COPS3-217ENST00000583160 GZF1Q9H116 711 aaPredicted RBP7.41□□□□□ -1.22
COPS3-217ENST00000583160 DAB2P98082 770 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 XPCQ01831 940 aaPredicted RBP7.4□□□□□ -1.22
COPS3-217ENST00000583160 PSMD2Q13200 908 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 ZBTB37Q5TC79 503 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 CDC37L1Q7L3B6 337 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 UBE3DQ7Z6J8 389 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 TP53INP2Q8IXH6 220 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 ABI1Q8IZP0 508 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 TOP6BLQ8N6T0 577 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 FAM181AQ8N9Y4 354 aa7.4□□□□□ -1.22
COPS3-217ENST00000583160 TAL1P17542 331 aaPredicted RBP7.39□□□□□ -1.23
COPS3-217ENST00000583160 LMNB1P20700 586 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 MAP3K11Q16584 847 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.39□□□□□ -1.23
COPS3-217ENST00000583160 HDXQ7Z353 690 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 FLCNQ8NFG4 579 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 NETO1Q8TDF5 533 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 GAL3ST3Q96A11 431 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
COPS3-217ENST00000583160 PRAMEF27A3QJZ7 478 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 RPS26P62854 115 aaKnown RBP7.38□□□□□ -1.23
COPS3-217ENST00000583160 CCDC27Q2M243 656 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 ARHGAP27Q6ZUM4 889 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 FBXO33Q7Z6M2 555 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 PLD6Q8N2A8 252 aaKnown RBP7.38□□□□□ -1.23
COPS3-217ENST00000583160 KCT2Q8NC54 265 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 ZNF507Q8TCN5 953 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 BCL7CQ8WUZ0 217 aaPredicted RBP7.38□□□□□ -1.23
COPS3-217ENST00000583160 FAM161BQ96MY7 647 aa7.38□□□□□ -1.23
COPS3-217ENST00000583160 PRDM10Q9NQV6 1147 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms