RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.29
SS18-222ENST00000582792 A0A0G2JLL6 359 aaPredicted RBP16.88■□□□□ 0.29
SS18-222ENST00000582792 UBTFL1P0CB47 393 aaPredicted RBP16.88■□□□□ 0.29
SS18-222ENST00000582792 RGS3P49796 1198 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 UBXN2AP68543 259 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 PRRT2Q7Z6L0 340 aaPredicted RBP16.88■□□□□ 0.29
SS18-222ENST00000582792 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 RNF208Q9H0X6 261 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 ZHX2Q9Y6X8 837 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 GAKO14976 1311 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 MYH2Q9UKX2 1941 aa16.88■□□□□ 0.29
SS18-222ENST00000582792 PTPRAP18433 802 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 IL15P40933 162 aaPredicted RBP16.87■□□□□ 0.29
SS18-222ENST00000582792 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 SLFN5Q08AF3 891 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
SS18-222ENST00000582792 HTATIP2Q9BUP3 242 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 GABRQQ9UN88 632 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 AFG3L2Q9Y4W6 797 aa16.87■□□□□ 0.29
SS18-222ENST00000582792 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
SS18-222ENST00000582792 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
SS18-222ENST00000582792 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
SS18-222ENST00000582792 PTPRFP10586 1907 aa16.86■□□□□ 0.29
SS18-222ENST00000582792 DOCK1Q14185 1865 aa16.85■□□□□ 0.29
SS18-222ENST00000582792 ADORA1P30542 326 aa16.85■□□□□ 0.29
SS18-222ENST00000582792 CCDC102BQ68D86 513 aa16.85■□□□□ 0.29
SS18-222ENST00000582792 GADL1Q6ZQY3 521 aa16.85■□□□□ 0.29
SS18-222ENST00000582792 DZIP1Q86YF9 867 aaKnown RBP16.85■□□□□ 0.29
SS18-222ENST00000582792 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
SS18-222ENST00000582792 U2AF1L4Q8WU68 220 aaKnown RBP16.85■□□□□ 0.29
SS18-222ENST00000582792 FAM163AQ96GL9 167 aaPredicted RBP16.85■□□□□ 0.29
SS18-222ENST00000582792 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
SS18-222ENST00000582792 PHIPQ8WWQ0 1821 aa16.84■□□□□ 0.29
SS18-222ENST00000582792 DDTLA6NHG4 134 aaPredicted RBP16.84■□□□□ 0.29
SS18-222ENST00000582792 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
SS18-222ENST00000582792 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
SS18-222ENST00000582792 SLF2Q8IX21 1173 aa16.84■□□□□ 0.29
SS18-222ENST00000582792 UNC93B1Q9H1C4 597 aa16.84■□□□□ 0.29
SS18-222ENST00000582792 COPRSQ9NQ92 184 aa16.84■□□□□ 0.29
SS18-222ENST00000582792 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
SS18-222ENST00000582792 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
SS18-222ENST00000582792 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
SS18-222ENST00000582792 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
SS18-222ENST00000582792 ADCY3O60266 1144 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 FARP2O94887 1054 aaPredicted RBP16.83■□□□□ 0.28
SS18-222ENST00000582792 SGPL1O95470 568 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 SLURP2P0DP57 97 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 FLT3LGP49771 235 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 IRF5Q13568 498 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 PXYLP1Q8TE99 480 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 PRO3102Q9H379 93 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 ABCF2Q9UG63 623 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 NR2E3Q9Y5X4 410 aa16.83■□□□□ 0.28
SS18-222ENST00000582792 MROH7-TTC4A0A0A0MT08 1334 aa16.82■□□□□ 0.28
SS18-222ENST00000582792 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
SS18-222ENST00000582792 TNPO2O14787 897 aaKnown RBP16.82■□□□□ 0.28
SS18-222ENST00000582792 CAPN2P17655 700 aa16.82■□□□□ 0.28
SS18-222ENST00000582792 BTDP43251 543 aa16.82■□□□□ 0.28
SS18-222ENST00000582792 PICALMQ13492 652 aa16.82■□□□□ 0.28
SS18-222ENST00000582792 SPTY2D1Q68D10 685 aaPredicted RBP16.82■□□□□ 0.28
SS18-222ENST00000582792 SMCR8Q8TEV9 937 aaPredicted RBP16.82■□□□□ 0.28
SS18-222ENST00000582792 AGTPBP1Q9UPW5 1226 aa16.82■□□□□ 0.28
SS18-222ENST00000582792 INHAP05111 366 aa16.81■□□□□ 0.28
SS18-222ENST00000582792 ELNP15502 786 aa16.81■□□□□ 0.28
SS18-222ENST00000582792 TIMM10P62072 90 aa16.81■□□□□ 0.28
SS18-222ENST00000582792 CDCA7LQ96GN5 454 aa16.81■□□□□ 0.28
SS18-222ENST00000582792 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
SS18-222ENST00000582792 GPR75-ASB3A0A0A6YYF3 556 aa16.8■□□□□ 0.28
SS18-222ENST00000582792 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
SS18-222ENST00000582792 ZBTB7BO15156 539 aaPredicted RBP16.8■□□□□ 0.28
SS18-222ENST00000582792 TBC1D12O60347 775 aa16.8■□□□□ 0.28
SS18-222ENST00000582792 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
SS18-222ENST00000582792 RHBDL3P58872 404 aa16.8■□□□□ 0.28
SS18-222ENST00000582792 CCDC84Q86UT8 332 aaPredicted RBP16.8■□□□□ 0.28
SS18-222ENST00000582792 API5Q9BZZ5 524 aaKnown RBP16.8■□□□□ 0.28
SS18-222ENST00000582792 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
SS18-222ENST00000582792 CT47B1P0C2W7 299 aaPredicted RBP16.79■□□□□ 0.28
SS18-222ENST00000582792 MECOMQ03112 1051 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
SS18-222ENST00000582792 ANKRD13CQ8N6S4 541 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 COA7Q96BR5 231 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 MEIS3Q99687 375 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 PAK6Q9NQU5 681 aaPredicted RBP16.79■□□□□ 0.28
SS18-222ENST00000582792 PNMA3Q9UL41 463 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
SS18-222ENST00000582792 LAMA3Q16787 3333 aa16.78■□□□□ 0.28
SS18-222ENST00000582792 TFRCP02786 760 aaKnown RBP16.78■□□□□ 0.28
SS18-222ENST00000582792 MVPQ14764 893 aaKnown RBP16.78■□□□□ 0.28
SS18-222ENST00000582792 FAM110CQ1W6H9 321 aa16.78■□□□□ 0.28
SS18-222ENST00000582792 TREML2Q5T2D2 321 aa16.78■□□□□ 0.28
SS18-222ENST00000582792 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
SS18-222ENST00000582792 ZNF384Q8TF68 577 aa16.78■□□□□ 0.28
SS18-222ENST00000582792 DEFB118Q96PH6 123 aa16.78■□□□□ 0.28
SS18-222ENST00000582792 CRISPLD2Q9H0B8 497 aa16.78■□□□□ 0.28
SS18-222ENST00000582792 OSBPL5Q9H0X9 879 aaPredicted RBP16.78■□□□□ 0.28
SS18-222ENST00000582792 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms