RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 STK35Q8TDR2 534 aa7.38□□□□□ -1.23
SMCHD1-206ENST00000581631 ALKBH8Q96BT7 664 aaKnown RBP7.38□□□□□ -1.23
SMCHD1-206ENST00000581631 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
SMCHD1-206ENST00000581631 TRAK1Q9UPV9 953 aa7.38□□□□□ -1.23
SMCHD1-206ENST00000581631 DBX1A6NMT0 343 aa7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 HCLS1P14317 486 aaPredicted RBP7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 EPS8L3Q8TE67 593 aaKnown RBP7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 TMEM40Q8WWA1 233 aa7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 ISL2Q96A47 359 aa7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 NIF3L1Q9GZT8 377 aa7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 PCOLCE2Q9UKZ9 415 aa7.37□□□□□ -1.23
SMCHD1-206ENST00000581631 GADD45BO75293 160 aaPredicted RBP7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 AOC3Q16853 763 aa7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 ZC3H12AQ5D1E8 599 aaKnown RBP7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 CILP2Q8IUL8 1156 aa7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 HRASLS5Q96KN8 279 aa7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 HEXIM2Q96MH2 286 aaKnown RBP7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 CSRNP1Q96S65 589 aa7.36□□□□□ -1.23
SMCHD1-206ENST00000581631 FARP2O94887 1054 aaPredicted RBP7.35□□□□□ -1.23
SMCHD1-206ENST00000581631 NTF4P34130 210 aa7.35□□□□□ -1.23
SMCHD1-206ENST00000581631 MESP2Q0VG99 397 aa7.35□□□□□ -1.23
SMCHD1-206ENST00000581631 FLAD1Q8NFF5 587 aa7.35□□□□□ -1.23
SMCHD1-206ENST00000581631 TMEM265A0A087WTH1 108 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 ERVK-24P63145 666 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 ZNF252P-AS1Q0IIN9 211 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 B4GALNT3Q6L9W6 998 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 PI16Q6UXB8 463 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 TOP6BLQ8N6T0 577 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 PI4K2BQ8TCG2 481 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 RBCK1Q9BYM8 510 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 KRTAP4-2Q9BYR5 136 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 TMEM39AQ9NV64 488 aa7.34□□□□□ -1.23
SMCHD1-206ENST00000581631 RNGTTO60942 597 aaKnown RBP7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 FCGRTP55899 365 aa7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 FBLN7Q53RD9 439 aa7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 SLC23A3Q6PIS1 610 aa7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 SULF2Q8IWU5 870 aa7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 RNF214Q8ND24 703 aa7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 SNX11Q9Y5W9 270 aa7.33□□□□□ -1.24
SMCHD1-206ENST00000581631 ANGEL2Q5VTE6 544 aaKnown RBP7.32□□□□□ -1.24
SMCHD1-206ENST00000581631 DTHD1Q6ZMT9 781 aa7.32□□□□□ -1.24
SMCHD1-206ENST00000581631 DMRTB1Q96MA1 342 aa7.32□□□□□ -1.24
SMCHD1-206ENST00000581631 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
SMCHD1-206ENST00000581631 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 IGF2BP3O00425 579 aaKnown RBP eCLIP7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 XRCC5P13010 732 aaKnown RBP7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 ARNTP27540 789 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 PPP2R3AQ06190 1150 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 RING1Q06587 406 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 UBE3DQ7Z6J8 389 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 SPACA3Q8IXA5 215 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 GPBAR1Q8TDU6 330 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 KCNB2Q92953 911 aa7.31□□□□□ -1.24
SMCHD1-206ENST00000581631 ZNF503-AS2A6NEH8 195 aa7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 NME2P22392 152 aa7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 HNRNPUQ00839 825 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 C3orf58Q8NDZ4 430 aa7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 BCO2Q9BYV7 579 aa7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 PRDM7Q9NQW5 492 aa7.3□□□□□ -1.24
SMCHD1-206ENST00000581631 ITIH2P19823 946 aa7.29□□□□□ -1.24
SMCHD1-206ENST00000581631 NKPD1Q17RQ9 610 aa7.29□□□□□ -1.24
SMCHD1-206ENST00000581631 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
SMCHD1-206ENST00000581631 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMCHD1-206ENST00000581631 BHLHE22Q8NFJ8 381 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-206ENST00000581631 MAP1SQ66K74 1059 aaPredicted RBP7.28□□□□□ -1.24
SMCHD1-206ENST00000581631 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
SMCHD1-206ENST00000581631 CTNND2Q9UQB3 1225 aa7.28□□□□□ -1.24
SMCHD1-206ENST00000581631 DSC3Q14574 896 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 PPM1JQ5JR12 505 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 ARHGAP27Q6ZUM4 889 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 KSR1Q8IVT5 923 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 ASB11Q8WXH4 323 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 FAM84AQ96KN4 292 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 NECAB3Q96P71 396 aaPredicted RBP7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 PRDM10Q9NQV6 1147 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 PITPNM2Q9BZ72 1349 aa7.27□□□□□ -1.25
SMCHD1-206ENST00000581631 EOMESO95936 686 aa7.26□□□□□ -1.25
SMCHD1-206ENST00000581631 BMP6P22004 513 aa7.26□□□□□ -1.25
SMCHD1-206ENST00000581631 NXPE4Q6UWF7 544 aa7.26□□□□□ -1.25
SMCHD1-206ENST00000581631 TMC7Q7Z402 723 aa7.26□□□□□ -1.25
SMCHD1-206ENST00000581631 EMILIN2Q9BXX0 1053 aa7.26□□□□□ -1.25
SMCHD1-206ENST00000581631 ENC1O14682 589 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 C1QL4Q86Z23 238 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 GRIN3AQ8TCU5 1115 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 TMC1Q8TDI8 760 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 SSU72Q9NP77 194 aaKnown RBP7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 NLRP2Q9NX02 1062 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 GTF2IRD1Q9UHL9 959 aa7.25□□□□□ -1.25
SMCHD1-206ENST00000581631 LRRC10BA6NIK2 292 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 TRIM37O94972 964 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 CLCN7P51798 805 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 ZP2Q05996 745 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 PKN1Q16512 942 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 ZBTB37Q5TC79 503 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 FYB2Q5VWT5 728 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms