RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
CUEDC1-209ENST00000581391 AIDAQ96BJ3 306 aa16.58■□□□□ 0.24
CUEDC1-209ENST00000581391 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
CUEDC1-209ENST00000581391 OTOFQ9HC10 1997 aa16.58■□□□□ 0.24
CUEDC1-209ENST00000581391 FAM196BA6NMK8 535 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 ENTPD3O75355 529 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 PPP4CP60510 307 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 ANKRD13AQ8IZ07 590 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
CUEDC1-209ENST00000581391 TRPA1O75762 1119 aa16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 PDE6AP16499 860 aa16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 HDAC1Q13547 482 aaPredicted RBP16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 WRNIP1Q96S55 665 aa16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 HAUS7Q99871 368 aa16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 PAG1Q9NWQ8 432 aa16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 RNF186Q9NXI6 227 aa16.56■□□□□ 0.24
CUEDC1-209ENST00000581391 DOCK2Q92608 1830 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 CTCFP49711 727 aaPredicted RBP16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 MAP3K12Q12852 859 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 OPTNQ96CV9 577 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 ZNF341Q9BYN7 854 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 ECHDC1Q9NTX5 307 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 SNCAIPQ9Y6H5 919 aa16.55■□□□□ 0.24
CUEDC1-209ENST00000581391 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 ATRNL1Q5VV63 1379 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 ZNF532Q9HCE3 1301 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 BAG3O95817 575 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 NOL10Q9BSC4 688 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 OSBPL5Q9H0X9 879 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 SAP30BPQ9UHR5 308 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 CASP8AP2Q9UKL3 1982 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
CUEDC1-209ENST00000581391 PHF20L1A8MW92 1017 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 TM4SF4P48230 202 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 CSADQ9Y600 493 aa16.53■□□□□ 0.24
CUEDC1-209ENST00000581391 TBC1D8O95759 1140 aa16.52■□□□□ 0.24
CUEDC1-209ENST00000581391 EVX2Q03828 476 aa16.52■□□□□ 0.24
CUEDC1-209ENST00000581391 CCDC84Q86UT8 332 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-209ENST00000581391 PTPN18Q99952 460 aa16.52■□□□□ 0.24
CUEDC1-209ENST00000581391 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
CUEDC1-209ENST00000581391 FLT1P17948 1338 aa16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 IGF2BP3O00425 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 ADD2P35612 726 aa16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 PI4K2BQ8TCG2 481 aa16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
CUEDC1-209ENST00000581391 UNCXA6NJT0 531 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 PRKAB2O43741 272 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 ZBTB48P10074 688 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 PLCG2P16885 1265 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 MAP3K10Q02779 954 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 SHROOM1Q2M3G4 852 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 LCORLQ8N3X6 602 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 HOOK2Q96ED9 719 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
CUEDC1-209ENST00000581391 SALL3Q9BXA9 1300 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 IRF6O14896 467 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 USP5P45974 858 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 JAG1P78504 1218 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 BRI3BPQ8WY22 251 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 SIPA1L1O43166 1804 aa16.49■□□□□ 0.23
CUEDC1-209ENST00000581391 FOCADQ5VW36 1801 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 MANSC4A6NHS7 340 aaPredicted RBP16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 MX1P20591 662 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 AAMPQ13685 434 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 ERO1BQ86YB8 467 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 IFNL1Q8IU54 200 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 GPATCH3Q96I76 525 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 MYH1P12882 1939 aa16.48■□□□□ 0.23
CUEDC1-209ENST00000581391 IGSF3O75054 1194 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms