RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 OTUD7AQ8TE49 926 aaPredicted RBP16.13■□□□□ 0.17
NUP85-215ENST00000580879 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 WNK4Q96J92 1243 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 WRNIP1Q96S55 665 aa16.13■□□□□ 0.17
NUP85-215ENST00000580879 HSPA8P11142 646 aaKnown RBP16.12■□□□□ 0.17
NUP85-215ENST00000580879 GJA5P36382 358 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 LBX1P52954 281 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
NUP85-215ENST00000580879 TTF1Q15361 905 aaPredicted RBP16.12■□□□□ 0.17
NUP85-215ENST00000580879 ZKSCAN4Q969J2 545 aaPredicted RBP16.12■□□□□ 0.17
NUP85-215ENST00000580879 HAUS7Q99871 368 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 ZNF341Q9BYN7 854 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 ECHDC1Q9NTX5 307 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 OTOFQ9HC10 1997 aa16.12■□□□□ 0.17
NUP85-215ENST00000580879 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 PDE6AP16499 860 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 INPP5BP32019 993 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 PPP4CP60510 307 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 SLC9C2Q5TAH2 1124 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 CSADQ9Y600 493 aa16.11■□□□□ 0.17
NUP85-215ENST00000580879 UNCXA6NJT0 531 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 TRPA1O75762 1119 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 MAP4K4O95819 1239 aaPredicted RBP16.1■□□□□ 0.17
NUP85-215ENST00000580879 PLCG2P16885 1265 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 AAMPQ13685 434 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 COL13A1Q5TAT6 717 aaPredicted RBP16.1■□□□□ 0.17
NUP85-215ENST00000580879 OPTNQ96CV9 577 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 GPATCH3Q96I76 525 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 OSBPL5Q9H0X9 879 aaPredicted RBP16.1■□□□□ 0.17
NUP85-215ENST00000580879 RNF186Q9NXI6 227 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 SNCAIPQ9Y6H5 919 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 ATRNL1Q5VV63 1379 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
NUP85-215ENST00000580879 FAM196BA6NMK8 535 aa16.09■□□□□ 0.17
NUP85-215ENST00000580879 IGSF3O75054 1194 aa16.09■□□□□ 0.17
NUP85-215ENST00000580879 IGHDP01880 384 aa16.09■□□□□ 0.17
NUP85-215ENST00000580879 CHGBP05060 677 aa16.09■□□□□ 0.17
NUP85-215ENST00000580879 OTUD5Q96G74 571 aa16.09■□□□□ 0.17
NUP85-215ENST00000580879 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
NUP85-215ENST00000580879 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
NUP85-215ENST00000580879 CA12O43570 354 aa16.08■□□□□ 0.16
NUP85-215ENST00000580879 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
NUP85-215ENST00000580879 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
NUP85-215ENST00000580879 SLC4A8Q2Y0W8 1093 aa16.08■□□□□ 0.16
NUP85-215ENST00000580879 GCC1Q96CN9 775 aa16.08■□□□□ 0.16
NUP85-215ENST00000580879 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
NUP85-215ENST00000580879 SAP30BPQ9UHR5 308 aaKnown RBP16.08■□□□□ 0.16
NUP85-215ENST00000580879 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
NUP85-215ENST00000580879 FLT1P17948 1338 aa16.08■□□□□ 0.16
NUP85-215ENST00000580879 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
NUP85-215ENST00000580879 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
NUP85-215ENST00000580879 TM4SF4P48230 202 aa16.07■□□□□ 0.16
NUP85-215ENST00000580879 SREBF2Q12772 1141 aa16.07■□□□□ 0.16
NUP85-215ENST00000580879 B4GALNT3Q6L9W6 998 aa16.07■□□□□ 0.16
NUP85-215ENST00000580879 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
NUP85-215ENST00000580879 RIOK1Q9BRS2 568 aaKnown RBP16.07■□□□□ 0.16
NUP85-215ENST00000580879 MANSC4A6NHS7 340 aaPredicted RBP16.06■□□□□ 0.16
NUP85-215ENST00000580879 SPDYE5A6NIY4 337 aa16.06■□□□□ 0.16
NUP85-215ENST00000580879 PHF20L1A8MW92 1017 aa16.06■□□□□ 0.16
NUP85-215ENST00000580879 ADD2P35612 726 aa16.06■□□□□ 0.16
NUP85-215ENST00000580879 USP5P45974 858 aa16.06■□□□□ 0.16
NUP85-215ENST00000580879 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.163e-7■■■■□ 25.2
NUP85-215ENST00000580879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.06■□□□□ 0.16
NUP85-215ENST00000580879 PALD1Q9ULE6 856 aa16.06■□□□□ 0.16
NUP85-215ENST00000580879 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
NUP85-215ENST00000580879 MX1P20591 662 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 MAP3K10Q02779 954 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
NUP85-215ENST00000580879 ERO1BQ86YB8 467 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 LNPKQ9C0E8 428 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 SAGE1Q9NXZ1 904 aa16.05■□□□□ 0.16
NUP85-215ENST00000580879 TTC41PQ6P2S7 1318 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 IGF2BP3O00425 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
NUP85-215ENST00000580879 IRF6O14896 467 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 TBC1D8O95759 1140 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 NOL9Q5SY16 702 aaKnown RBP16.04■□□□□ 0.16
NUP85-215ENST00000580879 IFNL1Q8IU54 200 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 MS4A4AQ96JQ5 239 aa16.04■□□□□ 0.16
NUP85-215ENST00000580879 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.04■□□□□ 0.16
NUP85-215ENST00000580879 CCL15-CCL14A0A0B4J2E2 113 aa16.03■□□□□ 0.16
NUP85-215ENST00000580879 ERC2O15083 957 aa16.03■□□□□ 0.16
NUP85-215ENST00000580879 TBC1D12O60347 775 aa16.03■□□□□ 0.16
NUP85-215ENST00000580879 MBD4O95243 580 aa16.03■□□□□ 0.16
NUP85-215ENST00000580879 CCL15Q16663 113 aa16.03■□□□□ 0.16
NUP85-215ENST00000580879 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
NUP85-215ENST00000580879 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
NUP85-215ENST00000580879 KBTBD3Q8NAB2 608 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms