RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 GYG1P46976 350 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 NTRK3Q16288 839 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 XPO4Q9C0E2 1151 aaKnown RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 SLIT2O94813 1529 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 NUTM2BA6NNL0 878 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 NUTM2EB1AL46 878 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 PATL2C9JE40 543 aaKnown RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 UQCRFS1P1P0C7P4 283 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 EVX2Q03828 476 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 DMTNQ08495 405 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 SLC4A8Q2Y0W8 1093 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 NBPF11Q86T75 865 aa12.14□□□□□ -0.47
TOP3A-209ENST00000580095 NUTM2AQ8IVF1 878 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 V9GYY5 206 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-209ENST00000580095 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 PRDM1O75626 825 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 SYKP43405 635 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
TOP3A-209ENST00000580095 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 NR5A1Q13285 461 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 SLC39A14Q15043 492 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
TOP3A-209ENST00000580095 SARM1Q6SZW1 724 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 TMC6Q7Z403 805 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 MRFAP1L1Q96HT8 127 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 NAT10Q9H0A0 1025 aaKnown RBP12.13□□□□□ -0.47
TOP3A-209ENST00000580095 CCDC87Q9NVE4 849 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 JAG2Q9Y219 1238 aa12.13□□□□□ -0.47
TOP3A-209ENST00000580095 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 CAVIN2O95810 425 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 TRIM29Q14134 588 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 TICAM2Q86XR7 235 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 MROH5Q6ZUA9 1318 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 CMA1P23946 247 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 SIK1P57059 783 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 CHRNDQ07001 517 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 AKNAD1Q5T1N1 836 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 CPLX2Q6PUV4 134 aaKnown RBP12.12□□□□□ -0.47
TOP3A-209ENST00000580095 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 PDILTQ8N807 584 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 AKAP11Q9UKA4 1901 aa12.12□□□□□ -0.47
TOP3A-209ENST00000580095 CYP7A1P22680 504 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 GTF2F1P35269 517 aaKnown RBP eCLIP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 CCZ1BP86790 482 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 PTPAQ15257 358 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 RAI14Q9P0K7 980 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 CDKL5O76039 1030 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 CAMTA2O94983 1202 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 CBX1P83916 185 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 DDB1Q16531 1140 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 ZNF827Q17R98 1081 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 FOXP4Q8IVH2 680 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 DPF2Q92785 391 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
TOP3A-209ENST00000580095 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-209ENST00000580095 NPHP1O15259 732 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 CDC25BP30305 580 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 IGHMBP2P38935 993 aaKnown RBP12.1□□□□□ -0.47
TOP3A-209ENST00000580095 NCAPHQ15003 741 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 SLC51AQ86UW1 340 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
TOP3A-209ENST00000580095 MARCH10Q8NA82 808 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-209ENST00000580095 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 ABCC12Q96J65 1359 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 DYNLL1P63167 89 aaKnown RBP12.1□□□□□ -0.47
TOP3A-209ENST00000580095 TOB1P50616 345 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-209ENST00000580095 NLRP12P59046 1061 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 WTAPQ15007 396 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 CEP135Q66GS9 1140 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 ARMCX5Q6P1M9 558 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 USP49Q70CQ1 688 aa12.1□□□□□ -0.47
TOP3A-209ENST00000580095 KLRK1P26718 216 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 RTN1Q16799 776 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 PTF1AQ7RTS3 328 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
TOP3A-209ENST00000580095 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
TOP3A-209ENST00000580095 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms