RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 UBXN2AP68543 259 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 CAP1Q01518 475 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 NFIAQ12857 509 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 HABP4Q5JVS0 413 aaKnown RBP16.53■□□□□ 0.24
TRAF4-214ENST00000580073 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 ARHGAP39Q9C0H5 1083 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 NOB1Q9ULX3 412 aaKnown RBP16.53■□□□□ 0.24
TRAF4-214ENST00000580073 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
TRAF4-214ENST00000580073 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
TRAF4-214ENST00000580073 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
TRAF4-214ENST00000580073 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-214ENST00000580073 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
TRAF4-214ENST00000580073 ARHGAP45Q92619 1136 aa16.52■□□□□ 0.24
TRAF4-214ENST00000580073 FAM198AQ9UFP1 575 aa16.52■□□□□ 0.24
TRAF4-214ENST00000580073 ABCF2Q9UG63 623 aa16.52■□□□□ 0.24
TRAF4-214ENST00000580073 ATRNL1Q5VV63 1379 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 CAPN2P17655 700 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 GRK4P32298 578 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 RGS3P49796 1198 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 GSTO1P78417 241 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 ERICH6Q7L0X2 663 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 SLAIN1Q8ND83 568 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 PNMA3Q9UL41 463 aa16.51■□□□□ 0.23
TRAF4-214ENST00000580073 A0A0G2JLL6 359 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-214ENST00000580073 OSBPP22059 807 aa16.5■□□□□ 0.23
TRAF4-214ENST00000580073 PRRT2Q7Z6L0 340 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-214ENST00000580073 FAM163AQ96GL9 167 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-214ENST00000580073 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
TRAF4-214ENST00000580073 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
TRAF4-214ENST00000580073 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
TRAF4-214ENST00000580073 LDHCP07864 332 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 BTDP43251 543 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 SMCR8Q8TEV9 937 aaPredicted RBP16.49■□□□□ 0.23
TRAF4-214ENST00000580073 MEIS3Q99687 375 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 HTATIP2Q9BUP3 242 aa16.49■□□□□ 0.23
TRAF4-214ENST00000580073 PA2G4Q9UQ80 394 aaKnown RBP16.49■□□□□ 0.23
TRAF4-214ENST00000580073 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
TRAF4-214ENST00000580073 MYCP01106 439 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-214ENST00000580073 BCRP11274 1271 aa16.48■□□□□ 0.23
TRAF4-214ENST00000580073 PTPRAP18433 802 aa16.48■□□□□ 0.23
TRAF4-214ENST00000580073 MTX1Q13505 466 aa16.48■□□□□ 0.23
TRAF4-214ENST00000580073 GADL1Q6ZQY3 521 aa16.48■□□□□ 0.23
TRAF4-214ENST00000580073 NOL10Q9BSC4 688 aaKnown RBP16.48■□□□□ 0.23
TRAF4-214ENST00000580073 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
TRAF4-214ENST00000580073 ZHX2Q9Y6X8 837 aa16.48■□□□□ 0.23
TRAF4-214ENST00000580073 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
TRAF4-214ENST00000580073 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
TRAF4-214ENST00000580073 ADORA1P30542 326 aa16.47■□□□□ 0.23
TRAF4-214ENST00000580073 PICALMQ13492 652 aa16.47■□□□□ 0.23
TRAF4-214ENST00000580073 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
TRAF4-214ENST00000580073 TBC1D12O60347 775 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 GJB1P08034 283 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 GJA8P48165 433 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRAF4-214ENST00000580073 MOGSQ13724 837 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
TRAF4-214ENST00000580073 AFG3L2Q9Y4W6 797 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 MYH1P12882 1939 aa16.46■□□□□ 0.23
TRAF4-214ENST00000580073 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.22
TRAF4-214ENST00000580073 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 GPR75-ASB3A0A0A6YYF3 556 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 TNPO2O14787 897 aaKnown RBP16.45■□□□□ 0.22
TRAF4-214ENST00000580073 UQCRFS1P1P0C7P4 283 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 CYP2C8P10632 490 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 TRIM27P14373 513 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 PRKCZQ05513 592 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 GPAT2Q6NUI2 795 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 PROCA1Q8NCQ7 364 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-214ENST00000580073 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
TRAF4-214ENST00000580073 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 RNF208Q9H0X6 261 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 AGTPBP1Q9UPW5 1226 aa16.45■□□□□ 0.22
TRAF4-214ENST00000580073 DDTLA6NHG4 134 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-214ENST00000580073 TRIM75PA6NK02 468 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 IGSF3O75054 1194 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
TRAF4-214ENST00000580073 GNAI2P04899 355 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 CCL5P13501 91 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 PLCG2P16885 1265 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 TIMM10P62072 90 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 MECOMQ03112 1051 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 TFCP2Q12800 502 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 PXYLP1Q8TE99 480 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 COA7Q96BR5 231 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAF4-214ENST00000580073 AS3MTQ9HBK9 375 aa16.44■□□□□ 0.22
TRAF4-214ENST00000580073 CTGFP29279 349 aa16.43■□□□□ 0.22
TRAF4-214ENST00000580073 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-214ENST00000580073 G3BP1Q13283 466 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRAF4-214ENST00000580073 IRF5Q13568 498 aa16.43■□□□□ 0.22
TRAF4-214ENST00000580073 MTFR1Q15390 333 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms