RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 POLR2AP24928 1970 aaKnown RBP27.38■■□□□ 1.97
NDEL1-207ENST00000580012 PICALMQ13492 652 aa27.37■■□□□ 1.97
NDEL1-207ENST00000580012 AIDAQ96BJ3 306 aa27.37■■□□□ 1.97
NDEL1-207ENST00000580012 SEC62Q99442 399 aaKnown RBP27.37■■□□□ 1.97
NDEL1-207ENST00000580012 CRNKL1Q9BZJ0 848 aaKnown RBP27.37■■□□□ 1.97
NDEL1-207ENST00000580012 HELLSQ9NRZ9 838 aa27.37■■□□□ 1.97
NDEL1-207ENST00000580012 TMEM88BA6NKF7 163 aa27.36■■□□□ 1.97
NDEL1-207ENST00000580012 M0R2C6 588 aa27.36■■□□□ 1.97
NDEL1-207ENST00000580012 BMP2KLQ5H9B9 411 aa27.36■■□□□ 1.97
NDEL1-207ENST00000580012 FLT1P17948 1338 aa27.36■■□□□ 1.97
NDEL1-207ENST00000580012 ATRNL1Q5VV63 1379 aa27.35■■□□□ 1.97
NDEL1-207ENST00000580012 DDTLA6NHG4 134 aaPredicted RBP27.35■■□□□ 1.97
NDEL1-207ENST00000580012 FKBP1BP68106 108 aa27.35■■□□□ 1.97
NDEL1-207ENST00000580012 MAP3K10Q02779 954 aa27.35■■□□□ 1.97
NDEL1-207ENST00000580012 MAPKAPK5Q8IW41 473 aa27.35■■□□□ 1.97
NDEL1-207ENST00000580012 JMYQ8N9B5 988 aa27.35■■□□□ 1.97
NDEL1-207ENST00000580012 ECM29Q5VYK3 1845 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 HIP1O00291 1037 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 GPAA1O43292 621 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 PRKAB2O43741 272 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 NF2P35240 595 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 FAM227BQ96M60 508 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 ZNF408Q9H9D4 720 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 GBA2Q9HCG7 927 aaPredicted RBP27.34■■□□□ 1.97
NDEL1-207ENST00000580012 CREBZFQ9NS37 354 aa27.34■■□□□ 1.97
NDEL1-207ENST00000580012 COL2A1P02458 1487 aaPredicted RBP27.33■■□□□ 1.97
NDEL1-207ENST00000580012 USP5P45974 858 aa27.33■■□□□ 1.97
NDEL1-207ENST00000580012 NMIQ13287 307 aaPredicted RBP27.33■■□□□ 1.97
NDEL1-207ENST00000580012 MAP3K11Q16584 847 aa27.33■■□□□ 1.97
NDEL1-207ENST00000580012 MCMDC2Q4G0Z9 681 aa27.33■■□□□ 1.97
NDEL1-207ENST00000580012 DHX36Q9H2U1 1008 aaKnown RBP27.33■■□□□ 1.97
NDEL1-207ENST00000580012 DCP1AQ9NPI6 582 aaPredicted RBP27.33■■□□□ 1.97
NDEL1-207ENST00000580012 ATP8A2Q9NTI2 1148 aa27.33■■□□□ 1.97
NDEL1-207ENST00000580012 SSC5DA1L4H1 1573 aa27.33■■□□□ 1.97
NDEL1-207ENST00000580012 A0A0D9SFI3 127 aa27.32■■□□□ 1.96
NDEL1-207ENST00000580012 C2orf69Q8N8R5 385 aa27.32■■□□□ 1.96
NDEL1-207ENST00000580012 SDR42E1Q8WUS8 393 aa27.32■■□□□ 1.96
NDEL1-207ENST00000580012 HOOK2Q96ED9 719 aa27.32■■□□□ 1.96
NDEL1-207ENST00000580012 USP2O75604 605 aaPredicted RBP27.31■■□□□ 1.96
NDEL1-207ENST00000580012 GNAT2P19087 354 aa27.31■■□□□ 1.96
NDEL1-207ENST00000580012 METTL16Q86W50 562 aaKnown RBP27.31■■□□□ 1.96
NDEL1-207ENST00000580012 TLL2Q9Y6L7 1015 aa27.31■■□□□ 1.96
NDEL1-207ENST00000580012 SLC4A4Q9Y6R1 1079 aa27.31■■□□□ 1.96
NDEL1-207ENST00000580012 GSG1L2A8MUP6 293 aa27.3■■□□□ 1.96
NDEL1-207ENST00000580012 TBC1D12O60347 775 aa27.3■■□□□ 1.96
NDEL1-207ENST00000580012 CHMLP26374 656 aa27.3■■□□□ 1.96
NDEL1-207ENST00000580012 GIMAP6Q6P9H5 292 aa27.3■■□□□ 1.96
NDEL1-207ENST00000580012 SAPCD2Q86UD0 394 aa27.3■■□□□ 1.96
NDEL1-207ENST00000580012 CSRNP1Q96S65 589 aa27.3■■□□□ 1.96
NDEL1-207ENST00000580012 PATL2C9JE40 543 aaKnown RBP27.29■■□□□ 1.96
NDEL1-207ENST00000580012 PPP1R12BO60237 982 aaPredicted RBP27.29■■□□□ 1.96
NDEL1-207ENST00000580012 LDLRAD1Q5T700 205 aa27.29■■□□□ 1.96
NDEL1-207ENST00000580012 MOB2Q70IA6 237 aa27.29■■□□□ 1.96
NDEL1-207ENST00000580012 ZSCAN29Q8IWY8 852 aaPredicted RBP27.29■■□□□ 1.96
NDEL1-207ENST00000580012 PI4KBQ9UBF8 816 aa27.29■■□□□ 1.96
NDEL1-207ENST00000580012 PALD1Q9ULE6 856 aa27.29■■□□□ 1.96
NDEL1-207ENST00000580012 CCDC129Q6ZRS4 1044 aa27.28■■□□□ 1.96
NDEL1-207ENST00000580012 FOXP4Q8IVH2 680 aaPredicted RBP27.28■■□□□ 1.96
NDEL1-207ENST00000580012 DIAPH3Q9NSV4 1193 aa27.28■■□□□ 1.96
NDEL1-207ENST00000580012 ZNF112Q9UJU3 913 aa27.28■■□□□ 1.96
NDEL1-207ENST00000580012 UNCXA6NJT0 531 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 FOXP2O15409 715 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 DCAF15Q66K64 600 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 CWC27Q6UX04 472 aaKnown RBP27.27■■□□□ 1.96
NDEL1-207ENST00000580012 MIGA2Q7L4E1 593 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 ARMC9Q7Z3E5 817 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 HHIPL1Q96JK4 782 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 SAP30BPQ9UHR5 308 aaKnown RBP27.27■■□□□ 1.96
NDEL1-207ENST00000580012 FZD1Q9UP38 647 aa27.27■■□□□ 1.96
NDEL1-207ENST00000580012 UBE2Q2LH0YL09 131 aa27.26■■□□□ 1.95
NDEL1-207ENST00000580012 ZNF589Q86UQ0 364 aaPredicted RBP27.26■■□□□ 1.95
NDEL1-207ENST00000580012 MCM9Q9NXL9 1143 aa27.26■■□□□ 1.95
NDEL1-207ENST00000580012 ANGEL1Q9UNK9 670 aaKnown RBP27.26■■□□□ 1.95
NDEL1-207ENST00000580012 PRKG1Q13976 671 aa27.25■■□□□ 1.95
NDEL1-207ENST00000580012 TTC6Q86TZ1 520 aa27.25■■□□□ 1.95
NDEL1-207ENST00000580012 ZNF341Q9BYN7 854 aa27.25■■□□□ 1.95
NDEL1-207ENST00000580012 MYH7P12883 1935 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 RASSF10A6NK89 507 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 PHF20L1A8MW92 1017 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 SLURP2P0DP57 97 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 PLCD1P51178 756 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 HUNKP57058 714 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 SBK1Q52WX2 424 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 IFNL3Q8IZI9 196 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.24■■□□□ 1.95
NDEL1-207ENST00000580012 EHD4Q9H223 541 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 EPB41L4AQ9HCS5 686 aaPredicted RBP27.24■■□□□ 1.95
NDEL1-207ENST00000580012 GTF3C3Q9Y5Q9 886 aa27.24■■□□□ 1.95
NDEL1-207ENST00000580012 CCDC171Q6TFL3 1326 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 USP17L12C9JPN9 530 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 USP17L21D6R901 530 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 IREB2P48200 963 aaKnown RBP27.23■■□□□ 1.95
NDEL1-207ENST00000580012 TTLL12Q14166 644 aaPredicted RBP27.23■■□□□ 1.95
NDEL1-207ENST00000580012 ALX1Q15699 326 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 C12orf60Q5U649 245 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 VPS53Q5VIR6 699 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 CTR9Q6PD62 1173 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 IL25Q9H293 177 aa27.23■■□□□ 1.95
NDEL1-207ENST00000580012 HERC5Q9UII4 1024 aaKnown RBP27.23■■□□□ 1.95
NDEL1-207ENST00000580012 ABT1Q9ULW3 272 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms