RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 SMAD3P84022 425 aaKnown RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 MAP3K12Q12852 859 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 AIMP1Q12904 312 aaKnown RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 G2E3Q7L622 706 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 SLC51AQ86UW1 340 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 ANKRD18AQ8IVF6 992 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 C7orf61Q8IZ16 206 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 OXER1Q8TDS5 423 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 PARK7Q99497 189 aaKnown RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 ISCA1Q9BUE6 129 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 C11orf49Q9H6J7 331 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 SLC45A1Q9Y2W3 748 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 RPAP1Q9BWH6 1393 aaPredicted RBP4.28□□□□□ -1.72
CDH19-204ENST00000579658 IL16Q14005 1332 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 SASH1O94885 1247 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 GOLGA2Q08379 1002 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 PRKG1Q13976 671 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 TWISTNBQ3B726 338 aaPredicted RBP4.28□□□□□ -1.72
CDH19-204ENST00000579658 HDGFL1Q5TGJ6 251 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 PRAMEF18Q5VWM3 479 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 COPS6Q7L5N1 327 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 TRMT44Q8IYL2 757 aaKnown RBP4.28□□□□□ -1.72
CDH19-204ENST00000579658 TRMT2AQ8IZ69 625 aaKnown RBP4.28□□□□□ -1.72
CDH19-204ENST00000579658 PLBD2Q8NHP8 589 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 ZNF592Q92610 1267 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 SNX27Q96L92 541 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 ANKRD2Q9GZV1 360 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 UNC93B1Q9H1C4 597 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 ELP3Q9H9T3 547 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 ADCY3O60266 1144 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 HOXB7P09629 217 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 CAP1Q01518 475 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 PPATQ06203 517 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 AMHR2Q16671 573 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 FAM43AQ8N2R8 423 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 XAGE3Q8WTP9 111 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 KCNH6Q9H252 994 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 SERPINA10Q9UK55 444 aa4.28□□□□□ -1.72
CDH19-204ENST00000579658 E9PSI1 815 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 IRS4O14654 1257 aaPredicted RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 PDE8AO60658 829 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 INHAP05111 366 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 FOSL2P15408 326 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 CALD1Q05682 793 aaKnown RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 DCAF15Q66K64 600 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 C15orf52Q6ZUT6 534 aaKnown RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 ZBTB38Q8NAP3 1195 aaPredicted RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDH19-204ENST00000579658 CDX2Q99626 313 aaPredicted RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 LBHD1Q9BQE6 289 aaPredicted RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.27□□□□□ -1.73
CDH19-204ENST00000579658 LTBP2Q14767 1821 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 BTBD19C9JJ37 291 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 TTLL5Q6EMB2 1281 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 EFCAB3Q8N7B9 438 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 PAWRQ96IZ0 340 aaKnown RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 P2RX7Q99572 595 aaKnown RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 ARHGAP39Q9C0H5 1083 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 SEMA6BQ9H3T3 888 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 GOPCQ9HD26 462 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 BSDC1Q9NW68 430 aaPredicted RBP4.27□□□□□ -1.73
CDH19-204ENST00000579658 SPEF2Q9C093 1822 aa4.27□□□□□ -1.73
CDH19-204ENST00000579658 IRF6O14896 467 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 MYCP01106 439 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 HMGCRP04035 888 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 BCRP11274 1271 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 FOXK2Q01167 660 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 VGLL4Q14135 290 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 AKNAD1Q5T1N1 836 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 FKBP1CQ5VVH2 108 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 JARID2Q92833 1246 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 FBXW7Q969H0 707 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 COA7Q96BR5 231 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 CCDC97Q96F63 343 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 DEFB118Q96PH6 123 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 TSPYL2Q9H2G4 693 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 ZMYND8Q9ULU4 1186 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 KCNH4Q9UQ05 1017 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 TNNQ9UQP3 1299 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 CEP290O15078 2479 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 F6X3S4 739 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 ATP5J2-PTCD1G3V325 749 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 PCCAP05165 728 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 CCT4P50991 539 aaKnown RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 PRKCZQ05513 592 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 RASA3Q14644 834 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 CFAP100Q494V2 611 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 NBPF12Q5TAG4 269 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 FASTKD5Q7L8L6 764 aaKnown RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 FAM177A1Q8N128 213 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 PROCA1Q8NCQ7 364 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 MYH16Q9H6N6 1097 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 DBF4Q9UBU7 674 aaPredicted RBP4.26□□□□□ -1.73
CDH19-204ENST00000579658 OGDHLQ9ULD0 1010 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 COG6Q9Y2V7 657 aa4.26□□□□□ -1.73
CDH19-204ENST00000579658 A0A1B0GUL6 1792 aa4.25□□□□□ -1.73
CDH19-204ENST00000579658 CXCL11O14625 94 aa4.25□□□□□ -1.73
CDH19-204ENST00000579658 BCAR3O75815 825 aa4.25□□□□□ -1.73
CDH19-204ENST00000579658 MRPS5P82675 430 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms