RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 PRKG1Q13976 671 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 LRRFIP1Q32MZ4 808 aaKnown RBP12.14□□□□□ -0.47
MKS1-208ENST00000579358 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
MKS1-208ENST00000579358 MOB2Q70IA6 237 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
MKS1-208ENST00000579358 OSBPL5Q9H0X9 879 aaPredicted RBP12.14□□□□□ -0.47
MKS1-208ENST00000579358 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
MKS1-208ENST00000579358 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
MKS1-208ENST00000579358 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
MKS1-208ENST00000579358 NEFLP07196 543 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
MKS1-208ENST00000579358 MAP2K2P36507 400 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
MKS1-208ENST00000579358 DYNLL1P63167 89 aaKnown RBP12.13□□□□□ -0.47
MKS1-208ENST00000579358 NOGQ13253 232 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 SH3BP5LQ7L8J4 393 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 RASAL3Q86YV0 1011 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 ZFPM1Q8IX07 1006 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
MKS1-208ENST00000579358 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
MKS1-208ENST00000579358 FLT1P17948 1338 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 MAGEB6P1A0A0J9YX57 407 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
MKS1-208ENST00000579358 TICAM2Q86XR7 235 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 ZSCAN29Q8IWY8 852 aaPredicted RBP12.12□□□□□ -0.47
MKS1-208ENST00000579358 TGFBRAP1Q8WUH2 860 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 DHX36Q9H2U1 1008 aaKnown RBP12.12□□□□□ -0.47
MKS1-208ENST00000579358 FZD1Q9UP38 647 aa12.12□□□□□ -0.47
MKS1-208ENST00000579358 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
MKS1-208ENST00000579358 TBC1D12O60347 775 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 USP5P45974 858 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 APPBP2Q92624 585 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 EVI5LQ96CN4 794 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
MKS1-208ENST00000579358 ZNF112Q9UJU3 913 aa12.11□□□□□ -0.47
MKS1-208ENST00000579358 RNF113AO15541 343 aaKnown RBP12.1□□□□□ -0.47
MKS1-208ENST00000579358 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
MKS1-208ENST00000579358 GRM1Q13255 1194 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 VGLL4Q14135 290 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
MKS1-208ENST00000579358 CENPQQ7L2Z9 268 aaPredicted RBP12.1□□□□□ -0.47
MKS1-208ENST00000579358 MAPKAPK5Q8IW41 473 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
MKS1-208ENST00000579358 LCORLQ8N3X6 602 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 AIDAQ96BJ3 306 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 FSD1Q9BTV5 496 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
MKS1-208ENST00000579358 CSADQ9Y600 493 aa12.1□□□□□ -0.47
MKS1-208ENST00000579358 AOC2O75106 756 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 MBD4O95243 580 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 HLA-DOAP06340 250 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 ZBTB48P10074 688 aaPredicted RBP12.09□□□□□ -0.47
MKS1-208ENST00000579358 SLFNL1Q499Z3 407 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 NOL9Q5SY16 702 aaKnown RBP12.09□□□□□ -0.47
MKS1-208ENST00000579358 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 MIGA2Q7L4E1 593 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
MKS1-208ENST00000579358 SLC10A4Q96EP9 437 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 PUS7LQ9H0K6 701 aaKnown RBP12.09□□□□□ -0.47
MKS1-208ENST00000579358 ARMT1Q9H993 441 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 PI4KBQ9UBF8 816 aa12.09□□□□□ -0.47
MKS1-208ENST00000579358 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 CHGBP05060 677 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 PDE4AP27815 886 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
MKS1-208ENST00000579358 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 WNK4Q96J92 1243 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 EHD4Q9H223 541 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.08□□□□□ -0.48
MKS1-208ENST00000579358 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 SNCAIPQ9Y6H5 919 aa12.08□□□□□ -0.48
MKS1-208ENST00000579358 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 INPP5BP32019 993 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 KIF23Q02241 960 aaPredicted RBP12.07□□□□□ -0.48
MKS1-208ENST00000579358 ZMYM1Q5SVZ6 1142 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 TTC6Q86TZ1 520 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 SDR42E1Q8WUS8 393 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 ZKSCAN4Q969J2 545 aaPredicted RBP12.07□□□□□ -0.48
MKS1-208ENST00000579358 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 STRBPQ96SI9 672 aaKnown RBP12.07□□□□□ -0.48
MKS1-208ENST00000579358 ELP3Q9H9T3 547 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 DCP1AQ9NPI6 582 aaPredicted RBP12.07□□□□□ -0.48
MKS1-208ENST00000579358 WBP1LQ9NX94 342 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 PALD1Q9ULE6 856 aa12.07□□□□□ -0.48
MKS1-208ENST00000579358 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
MKS1-208ENST00000579358 MYO5AQ9Y4I1 1855 aaKnown RBP12.06□□□□□ -0.48
MKS1-208ENST00000579358 MANSC4A6NHS7 340 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms