RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 IDI2Q9BXS1 227 aa11.5□□□□□ -0.57
LINC00271-204ENST00000579057 USP40Q9NVE5 1235 aa11.5□□□□□ -0.57
LINC00271-204ENST00000579057 CPA4Q9UI42 421 aa11.5□□□□□ -0.57
LINC00271-204ENST00000579057 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
LINC00271-204ENST00000579057 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
LINC00271-204ENST00000579057 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
LINC00271-204ENST00000579057 PDHXO00330 501 aa11.49□□□□□ -0.57
LINC00271-204ENST00000579057 WDHD1O75717 1129 aaPredicted RBP11.49□□□□□ -0.57
LINC00271-204ENST00000579057 RGS3P49796 1198 aa11.49□□□□□ -0.57
LINC00271-204ENST00000579057 TIMM10P62072 90 aa11.49□□□□□ -0.57
LINC00271-204ENST00000579057 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
LINC00271-204ENST00000579057 MTX1Q13505 466 aa11.49□□□□□ -0.57
LINC00271-204ENST00000579057 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
LINC00271-204ENST00000579057 DDX4Q9NQI0 724 aaKnown RBP11.49□□□□□ -0.57
LINC00271-204ENST00000579057 GNL3LQ9NVN8 582 aaKnown RBP11.49□□□□□ -0.57
LINC00271-204ENST00000579057 LAMA3Q16787 3333 aa11.49□□□□□ -0.57
LINC00271-204ENST00000579057 DDTLA6NHG4 134 aaPredicted RBP11.48□□□□□ -0.57
LINC00271-204ENST00000579057 ENTPD3O75355 529 aa11.48□□□□□ -0.57
LINC00271-204ENST00000579057 BCRP11274 1271 aa11.48□□□□□ -0.57
LINC00271-204ENST00000579057 ARHGEF6Q15052 776 aa11.48□□□□□ -0.57
LINC00271-204ENST00000579057 HABP4Q5JVS0 413 aaKnown RBP11.48□□□□□ -0.57
LINC00271-204ENST00000579057 SHISA4Q96DD7 197 aa11.48□□□□□ -0.57
LINC00271-204ENST00000579057 FAM163AQ96GL9 167 aaPredicted RBP11.48□□□□□ -0.57
LINC00271-204ENST00000579057 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
LINC00271-204ENST00000579057 TNNQ9UQP3 1299 aa11.48□□□□□ -0.57
LINC00271-204ENST00000579057 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 A0A1B0GUL7 405 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
LINC00271-204ENST00000579057 MYCP01106 439 aaPredicted RBP11.47□□□□□ -0.57
LINC00271-204ENST00000579057 GNRH1P01148 92 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 OSBPP22059 807 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 PSMC4P43686 418 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 RHBDL3P58872 404 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 TFCP2Q12800 502 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 MTFR1Q15390 333 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 NBPF11Q86T75 865 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 ARHGAP45Q92619 1136 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 XAGE2Q96GT9 111 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
LINC00271-204ENST00000579057 SRRDQ9UH36 339 aa11.47□□□□□ -0.57
LINC00271-204ENST00000579057 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 MYO5AQ9Y4I1 1855 aaKnown RBP11.46□□□□□ -0.57
LINC00271-204ENST00000579057 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 MROH7-TTC4A0A0A0MT08 1334 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 A0A0G2JLL6 359 aaPredicted RBP11.46□□□□□ -0.57
LINC00271-204ENST00000579057 CXCL11O14625 94 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 CYP2C8P10632 490 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 PTPRAP18433 802 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 PRMT2P55345 433 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 KIF22Q14807 665 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 PI16Q6UXB8 463 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 PRRT2Q7Z6L0 340 aaPredicted RBP11.46□□□□□ -0.57
LINC00271-204ENST00000579057 SCYL3Q8IZE3 742 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 AFG3L2Q9Y4W6 797 aa11.46□□□□□ -0.57
LINC00271-204ENST00000579057 GPR75-ASB3A0A0A6YYF3 556 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 TRIM27P14373 513 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 BTDP43251 543 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 MECOMQ03112 1051 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 SLC4A8Q2Y0W8 1093 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 UBE2Q1Q7Z7E8 422 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 CCDC84Q86UT8 332 aaPredicted RBP11.45□□□□□ -0.58
LINC00271-204ENST00000579057 ZGPATQ8N5A5 531 aaKnown RBP11.45□□□□□ -0.58
LINC00271-204ENST00000579057 GCC1Q96CN9 775 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 ABCF2Q9UG63 623 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 ZHX2Q9Y6X8 837 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 LOC285556D6RIA3 1793 aa11.45□□□□□ -0.58
LINC00271-204ENST00000579057 PNMA6EA0A0J9YXQ4 647 aa11.44□□□□□ -0.58
LINC00271-204ENST00000579057 GNAI3P08754 354 aa11.44□□□□□ -0.58
LINC00271-204ENST00000579057 EVX2Q03828 476 aa11.44□□□□□ -0.58
LINC00271-204ENST00000579057 PRKCZQ05513 592 aa11.44□□□□□ -0.58
LINC00271-204ENST00000579057 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
LINC00271-204ENST00000579057 TBC1D9Q6ZT07 1266 aa11.44□□□□□ -0.58
LINC00271-204ENST00000579057 DZIP1Q86YF9 867 aaKnown RBP11.44□□□□□ -0.58
LINC00271-204ENST00000579057 NSUN4Q96CB9 384 aaKnown RBP11.44□□□□□ -0.58
LINC00271-204ENST00000579057 PARK7Q99497 189 aaKnown RBP11.44□□□□□ -0.58
LINC00271-204ENST00000579057 FOCADQ5VW36 1801 aa11.44□□□□□ -0.58
LINC00271-204ENST00000579057 COL2A1P02458 1487 aaPredicted RBP11.44□□□□□ -0.58
LINC00271-204ENST00000579057 MYPNQ86TC9 1320 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 FAM196BA6NMK8 535 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 CTNND1O60716 968 aaKnown RBP11.43□□□□□ -0.58
LINC00271-204ENST00000579057 BCAR3O75815 825 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 ARID4AP29374 1257 aaPredicted RBP11.43□□□□□ -0.58
LINC00271-204ENST00000579057 GRK4P32298 578 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 FXR1P51114 621 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00271-204ENST00000579057 PICALMQ13492 652 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
LINC00271-204ENST00000579057 GABRQQ9UN88 632 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 AKAP2Q9Y2D5 859 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 MAST2Q6P0Q8 1798 aa11.43□□□□□ -0.58
LINC00271-204ENST00000579057 H0YGN5 161 aa11.42□□□□□ -0.58
LINC00271-204ENST00000579057 TBC1D12O60347 775 aa11.42□□□□□ -0.58
LINC00271-204ENST00000579057 FMNL1O95466 1100 aaPredicted RBP11.42□□□□□ -0.58
LINC00271-204ENST00000579057 MCAMP43121 646 aa11.42□□□□□ -0.58
LINC00271-204ENST00000579057 TREML2Q5T2D2 321 aa11.42□□□□□ -0.58
LINC00271-204ENST00000579057 SPTY2D1Q68D10 685 aaPredicted RBP11.42□□□□□ -0.58
LINC00271-204ENST00000579057 ATF7IPQ6VMQ6 1270 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms