RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
ITGB4-204ENST00000578318 ERICH6Q7L0X2 663 aa17.88■□□□□ 0.45
ITGB4-204ENST00000578318 ZSCAN29Q8IWY8 852 aaPredicted RBP17.88■□□□□ 0.45
ITGB4-204ENST00000578318 SCYL3Q8IZE3 742 aa17.88■□□□□ 0.45
ITGB4-204ENST00000578318 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
ITGB4-204ENST00000578318 PICK1Q9NRD5 415 aa17.88■□□□□ 0.45
ITGB4-204ENST00000578318 MAP3K10Q02779 954 aa17.87■□□□□ 0.45
ITGB4-204ENST00000578318 SLC4A8Q2Y0W8 1093 aa17.87■□□□□ 0.45
ITGB4-204ENST00000578318 SH3BP5LQ7L8J4 393 aa17.87■□□□□ 0.45
ITGB4-204ENST00000578318 NEUROD6Q96NK8 337 aa17.87■□□□□ 0.45
ITGB4-204ENST00000578318 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
ITGB4-204ENST00000578318 PTPRFP10586 1907 aa17.86■□□□□ 0.45
ITGB4-204ENST00000578318 HOXD10P28358 340 aa17.86■□□□□ 0.45
ITGB4-204ENST00000578318 MECOMQ03112 1051 aa17.86■□□□□ 0.45
ITGB4-204ENST00000578318 PICALMQ13492 652 aa17.86■□□□□ 0.45
ITGB4-204ENST00000578318 SH3TC2Q8TF17 1288 aa17.86■□□□□ 0.45
ITGB4-204ENST00000578318 FRAT1Q92837 279 aaPredicted RBP17.86■□□□□ 0.45
ITGB4-204ENST00000578318 DDX4Q9NQI0 724 aaKnown RBP17.86■□□□□ 0.45
ITGB4-204ENST00000578318 PHIPQ8WWQ0 1821 aa17.86■□□□□ 0.45
ITGB4-204ENST00000578318 GPR75-ASB3A0A0A6YYF3 556 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 DDTLA6NHG4 134 aaPredicted RBP17.85■□□□□ 0.45
ITGB4-204ENST00000578318 MGAMO43451 1857 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 PTPRAP18433 802 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 CTGFP29279 349 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 PSMC4P43686 418 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 GSTO1P78417 241 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.45
ITGB4-204ENST00000578318 GORABQ5T7V8 394 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 GPAT2Q6NUI2 795 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 FASTKD5Q7L8L6 764 aaKnown RBP17.85■□□□□ 0.45
ITGB4-204ENST00000578318 SPATA5Q8NB90 893 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 HMG20BQ9P0W2 317 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 SRRDQ9UH36 339 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 TNNQ9UQP3 1299 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.85■□□□□ 0.45
ITGB4-204ENST00000578318 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
ITGB4-204ENST00000578318 A0A0G2JLL6 359 aaPredicted RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 BCAR3O75815 825 aa17.84■□□□□ 0.45
ITGB4-204ENST00000578318 ECM2O94769 699 aaPredicted RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 LDHCP07864 332 aa17.84■□□□□ 0.45
ITGB4-204ENST00000578318 ARID4AP29374 1257 aaPredicted RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 RHBDL3P58872 404 aa17.84■□□□□ 0.45
ITGB4-204ENST00000578318 PRRT2Q7Z6L0 340 aaPredicted RBP17.84■□□□□ 0.45
ITGB4-204ENST00000578318 TRIM47Q96LD4 638 aa17.84■□□□□ 0.45
ITGB4-204ENST00000578318 MYPNQ86TC9 1320 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 TBC1D12O60347 775 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 FMNL1O95466 1100 aaPredicted RBP17.83■□□□□ 0.44
ITGB4-204ENST00000578318 MYCP01106 439 aaPredicted RBP17.83■□□□□ 0.44
ITGB4-204ENST00000578318 BCRP11274 1271 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 OSBPP22059 807 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 ZNF384Q8TF68 577 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 CLUAP1Q96AJ1 413 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 NSUN4Q96CB9 384 aaKnown RBP17.83■□□□□ 0.44
ITGB4-204ENST00000578318 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
ITGB4-204ENST00000578318 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
ITGB4-204ENST00000578318 UQCRFS1P1P0C7P4 283 aa17.82■□□□□ 0.44
ITGB4-204ENST00000578318 CYP2C8P10632 490 aa17.82■□□□□ 0.44
ITGB4-204ENST00000578318 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
ITGB4-204ENST00000578318 RAET1EQ8TD07 263 aa17.82■□□□□ 0.44
ITGB4-204ENST00000578318 SLC45A1Q9Y2W3 748 aa17.82■□□□□ 0.44
ITGB4-204ENST00000578318 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 SLURP2P0DP57 97 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 FCGRTP55899 365 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 GADL1Q6ZQY3 521 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 RAI14Q9P0K7 980 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 ATAD5Q96QE3 1844 aa17.81■□□□□ 0.44
ITGB4-204ENST00000578318 GRK4P32298 578 aa17.8■□□□□ 0.44
ITGB4-204ENST00000578318 MCAMP43121 646 aa17.8■□□□□ 0.44
ITGB4-204ENST00000578318 GPR108Q9NPR9 543 aa17.8■□□□□ 0.44
ITGB4-204ENST00000578318 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
ITGB4-204ENST00000578318 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
ITGB4-204ENST00000578318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITGB4-204ENST00000578318 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
ITGB4-204ENST00000578318 PRKCZQ05513 592 aa17.78■□□□□ 0.44
ITGB4-204ENST00000578318 POLA2Q14181 598 aa17.78■□□□□ 0.44
ITGB4-204ENST00000578318 MTFR1Q15390 333 aa17.78■□□□□ 0.44
ITGB4-204ENST00000578318 TEX11Q8IYF3 940 aa17.78■□□□□ 0.44
ITGB4-204ENST00000578318 SMCR8Q8TEV9 937 aaPredicted RBP17.78■□□□□ 0.44
ITGB4-204ENST00000578318 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.78■□□□□ 0.44
ITGB4-204ENST00000578318 LOC285556D6RIA3 1793 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 UBXN2AP68543 259 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.44
ITGB4-204ENST00000578318 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 HABP4Q5JVS0 413 aaKnown RBP17.77■□□□□ 0.44
ITGB4-204ENST00000578318 CCDC158Q5M9N0 1113 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 TTC39AQ5SRH9 613 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 CCDC84Q86UT8 332 aaPredicted RBP17.77■□□□□ 0.44
ITGB4-204ENST00000578318 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 NKX2-3Q8TAU0 364 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 SSH3Q8TE77 659 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.44
ITGB4-204ENST00000578318 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms