RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 CERS3Q8IU89 383 aa28.05■■■□□ 2.08
LIMD2-204ENST00000578297 AIDAQ96BJ3 306 aa28.05■■■□□ 2.08
LIMD2-204ENST00000578297 ZBTB47Q9UFB7 747 aaPredicted RBP28.05■■■□□ 2.08
LIMD2-204ENST00000578297 IRX6P78412 446 aaPredicted RBP28.04■■■□□ 2.08
LIMD2-204ENST00000578297 SLC9C2Q5TAH2 1124 aa28.04■■■□□ 2.08
LIMD2-204ENST00000578297 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.04■■■□□ 2.08
LIMD2-204ENST00000578297 MIGA2Q7L4E1 593 aa28.04■■■□□ 2.08
LIMD2-204ENST00000578297 REM2Q8IYK8 340 aaPredicted RBP28.04■■■□□ 2.08
LIMD2-204ENST00000578297 ZNF341Q9BYN7 854 aa28.04■■■□□ 2.08
LIMD2-204ENST00000578297 OTOFQ9HC10 1997 aa28.04■■■□□ 2.08
LIMD2-204ENST00000578297 TTC41PQ6P2S7 1318 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 DDTLA6NHG4 134 aaPredicted RBP28.03■■■□□ 2.08
LIMD2-204ENST00000578297 IGHDP01880 384 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 PDE6AP16499 860 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 SPRYD7Q5W111 196 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 ZSCAN29Q8IWY8 852 aaPredicted RBP28.03■■■□□ 2.08
LIMD2-204ENST00000578297 SMC5Q8IY18 1101 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 CSRNP1Q96S65 589 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 BEGAINQ9BUH8 593 aa28.03■■■□□ 2.08
LIMD2-204ENST00000578297 ATRNL1Q5VV63 1379 aa28.02■■■□□ 2.08
LIMD2-204ENST00000578297 WRNIP1Q96S55 665 aa28.02■■■□□ 2.08
LIMD2-204ENST00000578297 OSBPL5Q9H0X9 879 aaPredicted RBP28.02■■■□□ 2.08
LIMD2-204ENST00000578297 COL2A1P02458 1487 aaPredicted RBP28.02■■■□□ 2.08
LIMD2-204ENST00000578297 FOXN1O15353 648 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 ZBTB48P10074 688 aaPredicted RBP28.01■■■□□ 2.07
LIMD2-204ENST00000578297 DYNLL1P63167 89 aaKnown RBP28.01■■■□□ 2.07
LIMD2-204ENST00000578297 MAP3K10Q02779 954 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 VGLL4Q14135 290 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 TSHZ3Q63HK5 1081 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 MIGA1Q8NAN2 632 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 ZNF112Q9UJU3 913 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 CSADQ9Y600 493 aa28.01■■■□□ 2.07
LIMD2-204ENST00000578297 TCRBV5S4A2TA0A5A2 114 aa28■■■□□ 2.07
LIMD2-204ENST00000578297 OTUD7AQ8TE49 926 aaPredicted RBP28■■■□□ 2.07
LIMD2-204ENST00000578297 TGFBRAP1Q8WUH2 860 aa28■■■□□ 2.07
LIMD2-204ENST00000578297 WNK4Q96J92 1243 aa28■■■□□ 2.07
LIMD2-204ENST00000578297 DDX24Q9GZR7 859 aaKnown RBP eCLIP28■■■□□ 2.07
LIMD2-204ENST00000578297 ZBTB4Q9P1Z0 1013 aaPredicted RBP28■■■□□ 2.07
LIMD2-204ENST00000578297 SALL3Q9BXA9 1300 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 ZNF532Q9HCE3 1301 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 ERC2O15083 957 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 CA12O43570 354 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 MKRN3Q13064 507 aaKnown RBP27.99■■■□□ 2.07
LIMD2-204ENST00000578297 ELP3Q9H9T3 547 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 CDK5RAP2Q96SN8 1893 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 FOCADQ5VW36 1801 aa27.99■■■□□ 2.07
LIMD2-204ENST00000578297 MX1P20591 662 aa27.98■■■□□ 2.07
LIMD2-204ENST00000578297 ADD2P35612 726 aa27.98■■■□□ 2.07
LIMD2-204ENST00000578297 CTCFP49711 727 aaPredicted RBP27.98■■■□□ 2.07
LIMD2-204ENST00000578297 PI4K2BQ8TCG2 481 aa27.98■■■□□ 2.07
LIMD2-204ENST00000578297 RIOK1Q9BRS2 568 aaKnown RBP27.98■■■□□ 2.07
LIMD2-204ENST00000578297 FLT1P17948 1338 aa27.97■■■□□ 2.07
LIMD2-204ENST00000578297 MAGEB6P1A0A0J9YX57 407 aa27.97■■■□□ 2.07
LIMD2-204ENST00000578297 GLRX3O76003 335 aaKnown RBP27.97■■■□□ 2.07
LIMD2-204ENST00000578297 ZKSCAN4Q969J2 545 aaPredicted RBP27.97■■■□□ 2.07
LIMD2-204ENST00000578297 OPTNQ96CV9 577 aa27.97■■■□□ 2.07
LIMD2-204ENST00000578297 DHX36Q9H2U1 1008 aaKnown RBP27.97■■■□□ 2.07
LIMD2-204ENST00000578297 TBC1D12O60347 775 aa27.96■■■□□ 2.07
LIMD2-204ENST00000578297 GJA5P36382 358 aa27.96■■■□□ 2.07
LIMD2-204ENST00000578297 TM4SF4P48230 202 aa27.96■■■□□ 2.07
LIMD2-204ENST00000578297 ZSCAN25Q6NSZ9 544 aa27.96■■■□□ 2.07
LIMD2-204ENST00000578297 MAPKAPK5Q8IW41 473 aa27.96■■■□□ 2.07
LIMD2-204ENST00000578297 SNCAIPQ9Y6H5 919 aa27.96■■■□□ 2.07
LIMD2-204ENST00000578297 PHF20L1A8MW92 1017 aa27.95■■■□□ 2.06
LIMD2-204ENST00000578297 INPP5BP32019 993 aa27.95■■■□□ 2.06
LIMD2-204ENST00000578297 SREBF2Q12772 1141 aa27.95■■■□□ 2.06
LIMD2-204ENST00000578297 UBE3CQ15386 1083 aa27.95■■■□□ 2.06
LIMD2-204ENST00000578297 MYH7P12883 1935 aa27.94■■■□□ 2.06
LIMD2-204ENST00000578297 LAMB1P07942 1786 aa27.94■■■□□ 2.06
LIMD2-204ENST00000578297 MANSC4A6NHS7 340 aaPredicted RBP27.94■■■□□ 2.06
LIMD2-204ENST00000578297 INHBEP58166 350 aa27.94■■■□□ 2.06
LIMD2-204ENST00000578297 KBTBD3Q8NAB2 608 aa27.94■■■□□ 2.06
LIMD2-204ENST00000578297 SAGE1Q9NXZ1 904 aa27.94■■■□□ 2.06
LIMD2-204ENST00000578297 STAP2Q9UGK3 403 aa27.94■■■□□ 2.06
LIMD2-204ENST00000578297 SPDYE5A6NIY4 337 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 HSPA8P11142 646 aaKnown RBP27.93■■■□□ 2.06
LIMD2-204ENST00000578297 USP5P45974 858 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 NUCB1Q02818 461 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 NOL9Q5SY16 702 aaKnown RBP27.93■■■□□ 2.06
LIMD2-204ENST00000578297 B4GALNT3Q6L9W6 998 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 ERO1BQ86YB8 467 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 LNPKQ9C0E8 428 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 PI4KBQ9UBF8 816 aa27.93■■■□□ 2.06
LIMD2-204ENST00000578297 SLFNL1Q499Z3 407 aa27.92■■■□□ 2.06
LIMD2-204ENST00000578297 CHD1LQ86WJ1 897 aa27.92■■■□□ 2.06
LIMD2-204ENST00000578297 CNKSR2Q8WXI2 1034 aa27.92■■■□□ 2.06
LIMD2-204ENST00000578297 RNF186Q9NXI6 227 aa27.92■■■□□ 2.06
LIMD2-204ENST00000578297 SLURP2P0DP57 97 aa27.91■■■□□ 2.06
LIMD2-204ENST00000578297 PDE1AP54750 535 aa27.91■■■□□ 2.06
LIMD2-204ENST00000578297 CRNKL1Q9BZJ0 848 aaKnown RBP27.91■■■□□ 2.06
LIMD2-204ENST00000578297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.91■■■□□ 2.06
LIMD2-204ENST00000578297 HERC5Q9UII4 1024 aaKnown RBP27.91■■■□□ 2.06
LIMD2-204ENST00000578297 PALD1Q9ULE6 856 aa27.91■■■□□ 2.06
LIMD2-204ENST00000578297 LBX1P52954 281 aa27.9■■■□□ 2.06
LIMD2-204ENST00000578297 METTL16Q86W50 562 aaKnown RBP27.9■■■□□ 2.06
LIMD2-204ENST00000578297 OTUD5Q96G74 571 aa27.9■■■□□ 2.06
LIMD2-204ENST00000578297 CTNND1O60716 968 aaKnown RBP27.89■■■□□ 2.06
LIMD2-204ENST00000578297 TRPA1O75762 1119 aa27.89■■■□□ 2.06
LIMD2-204ENST00000578297 CHGBP05060 677 aa27.89■■■□□ 2.06
LIMD2-204ENST00000578297 PPATQ06203 517 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms