RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 OSBPP22059 807 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 MVPQ14764 893 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 GPAT2Q6NUI2 795 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 SMC4Q9NTJ3 1288 aa13.95□□□□□ -0.18
SMARCE1-214ENST00000578112 PHF20L1A8MW92 1017 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 GSTO1P78417 241 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 UBE2Q1Q7Z7E8 422 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 OSBPL5Q9H0X9 879 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 GINM1Q9NU53 330 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 ZSWIM8A7E2V4 1837 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 TNRC18O15417 2968 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 PTPRFP10586 1907 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 LDHCP07864 332 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 GNAI3P08754 354 aa13.94□□□□□ -0.18
SMARCE1-214ENST00000578112 FMNL1O95466 1100 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 PRDX5P30044 214 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 FXR1P51114 621 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 ARHGAP39Q9C0H5 1083 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 CPA4Q9UI42 421 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 AFG3L2Q9Y4W6 797 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 AK9Q5TCS8 1911 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 PTPRAP18433 802 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.184e-8■□□□□ 9.6
SMARCE1-214ENST00000578112 MIGA2Q7L4E1 593 aa13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 PROCA1Q8NCQ7 364 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-214ENST00000578112 RGS3P49796 1198 aa13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 NFIAQ12857 509 aa13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 CCDC102BQ68D86 513 aa13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 SH3TC2Q8TF17 1288 aa13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 SHISA4Q96DD7 197 aa13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 NR2E3Q9Y5X4 410 aa13.92□□□□□ -0.18
SMARCE1-214ENST00000578112 GPR75-ASB3A0A0A6YYF3 556 aa13.91□□□□□ -0.18
SMARCE1-214ENST00000578112 DIXDC1Q155Q3 683 aa13.91□□□□□ -0.18
SMARCE1-214ENST00000578112 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-214ENST00000578112 AGTPBP1Q9UPW5 1226 aa13.91□□□□□ -0.18
SMARCE1-214ENST00000578112 CCL5P13501 91 aa13.91□□□□□ -0.18
SMARCE1-214ENST00000578112 GCLCP48506 637 aaPredicted RBP13.91□□□□□ -0.18
SMARCE1-214ENST00000578112 PHKA1P46020 1223 aa13.9□□□□□ -0.18
SMARCE1-214ENST00000578112 TCP10Q12799 353 aa13.9□□□□□ -0.18
SMARCE1-214ENST00000578112 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
SMARCE1-214ENST00000578112 CTGFP29279 349 aa13.9□□□□□ -0.18
SMARCE1-214ENST00000578112 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 HERC5Q9UII4 1024 aaKnown RBP13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 SH3D19Q5HYK7 790 aa13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 AS3MTQ9HBK9 375 aa13.89□□□□□ -0.19
SMARCE1-214ENST00000578112 ATAD5Q96QE3 1844 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 H0YGN5 161 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 IPO8O15397 1037 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 SGPL1O95470 568 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 BTDP43251 543 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 RASGRF1Q13972 1273 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 CERS3Q8IU89 383 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 COA7Q96BR5 231 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 GPR108Q9NPR9 543 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 PLCG2P16885 1265 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 PRKCZQ05513 592 aa13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
SMARCE1-214ENST00000578112 A0A1B0GUL7 405 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 ADCY3O60266 1144 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 FARP2O94887 1054 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 MTFR1Q15390 333 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 XAGE2Q96GT9 111 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 RNF208Q9H0X6 261 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 SIL1Q9H173 461 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 PRO3102Q9H379 93 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 FOCADQ5VW36 1801 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 TNPO2O14787 897 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 RHBDL3P58872 404 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 GADL1Q6ZQY3 521 aa13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 ZSCAN29Q8IWY8 852 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 U2AF1L4Q8WU68 220 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-214ENST00000578112 ZBTB7BO15156 539 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 SMCR8Q8TEV9 937 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 ADORA1P30542 326 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 MECOMQ03112 1051 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 ZFPM1Q8IX07 1006 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 DPF3Q92784 378 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 ZNF512BQ96KM6 892 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 WDR18Q9BV38 432 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 MORF4L1Q9UBU8 362 aa13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 BIN2Q9UBW5 565 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-214ENST00000578112 DDTLA6NHG4 134 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms