RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 NOL9Q5SY16 702 aaKnown RBP19.75■□□□□ 0.75
VAPA-204ENST00000577901 DDX19BQ9UMR2 479 aa19.75■□□□□ 0.75
VAPA-204ENST00000577901 KIAA0100Q14667 2235 aaKnown RBP19.74■□□□□ 0.75
VAPA-204ENST00000577901 PNMA6EA0A0J9YXQ4 647 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 CTGFP29279 349 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 PSMC4P43686 418 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 PHKA1P46020 1223 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 G3BP1Q13283 466 aaKnown RBP eCLIP19.74■□□□□ 0.752e-6■■■■□ 24.6
VAPA-204ENST00000577901 MOGSQ13724 837 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 PDE3AQ14432 1141 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 ZFPM1Q8IX07 1006 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 TRIM47Q96LD4 638 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 C1orf115Q9H7X2 142 aa19.74■□□□□ 0.75
VAPA-204ENST00000577901 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
VAPA-204ENST00000577901 SRRDQ9UH36 339 aa19.73■□□□□ 0.75
VAPA-204ENST00000577901 COG6Q9Y2V7 657 aa19.73■□□□□ 0.75
VAPA-204ENST00000577901 ADGRA2Q96PE1 1338 aa19.73■□□□□ 0.75
VAPA-204ENST00000577901 FMNL1O95466 1100 aaPredicted RBP19.72■□□□□ 0.75
VAPA-204ENST00000577901 HOXD10P28358 340 aa19.72■□□□□ 0.75
VAPA-204ENST00000577901 AKAP2Q9Y2D5 859 aa19.72■□□□□ 0.75
VAPA-204ENST00000577901 CXCL11O14625 94 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 OSBPP22059 807 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 ADORA1P30542 326 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 RGS3P49796 1198 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 POLA2Q14181 598 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 CCDC102BQ68D86 513 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 ZGPATQ8N5A5 531 aaKnown RBP19.71■□□□□ 0.75
VAPA-204ENST00000577901 SSH3Q8TE77 659 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 PARK7Q99497 189 aaKnown RBP19.71■□□□□ 0.75
VAPA-204ENST00000577901 IDI2Q9BXS1 227 aa19.71■□□□□ 0.75
VAPA-204ENST00000577901 ATRNL1Q5VV63 1379 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 PHF20L1A8MW92 1017 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 ZBTB22O15209 634 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 ENTPD3O75355 529 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 MTFR1Q15390 333 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 GPAT2Q6NUI2 795 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 RAET1EQ8TD07 263 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 PICK1Q9NRD5 415 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 GAKO14976 1311 aa19.7■□□□□ 0.74
VAPA-204ENST00000577901 AK9Q5TCS8 1911 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 SURF6O75683 361 aaKnown RBP19.69■□□□□ 0.74
VAPA-204ENST00000577901 CYP2C8P10632 490 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 GRK4P32298 578 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 TFCP2Q12800 502 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 DZIP1Q86YF9 867 aaKnown RBP19.69■□□□□ 0.74
VAPA-204ENST00000577901 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
VAPA-204ENST00000577901 SCYL3Q8IZE3 742 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 COLQQ9Y215 455 aaPredicted RBP19.69■□□□□ 0.74
VAPA-204ENST00000577901 ZHX2Q9Y6X8 837 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 MYPNQ86TC9 1320 aa19.69■□□□□ 0.74
VAPA-204ENST00000577901 BCRP11274 1271 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 TIMM10P62072 90 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 OS9Q13438 667 aaPredicted RBP19.68■□□□□ 0.74
VAPA-204ENST00000577901 RASGRF1Q13972 1273 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 CEP85Q6P2H3 762 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 SH3BP5LQ7L8J4 393 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 SLF2Q8IX21 1173 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 ABCF2Q9UG63 623 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 RFX7Q2KHR2 1363 aa19.68■□□□□ 0.74
VAPA-204ENST00000577901 A0A0G2JLL6 359 aaPredicted RBP19.67■□□□□ 0.74
VAPA-204ENST00000577901 H0YGN5 161 aa19.67■□□□□ 0.74
VAPA-204ENST00000577901 PTPRAP18433 802 aa19.67■□□□□ 0.74
VAPA-204ENST00000577901 FXR1P51114 621 aaKnown RBP eCLIP19.67■□□□□ 0.74
VAPA-204ENST00000577901 FCGRTP55899 365 aa19.67■□□□□ 0.74
VAPA-204ENST00000577901 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
VAPA-204ENST00000577901 FASTKD5Q7L8L6 764 aaKnown RBP19.67■□□□□ 0.74
VAPA-204ENST00000577901 PRRT2Q7Z6L0 340 aaPredicted RBP19.67■□□□□ 0.74
VAPA-204ENST00000577901 RPAP2Q8IXW5 612 aaPredicted RBP19.67■□□□□ 0.74
VAPA-204ENST00000577901 SHISA4Q96DD7 197 aa19.67■□□□□ 0.74
VAPA-204ENST00000577901 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
VAPA-204ENST00000577901 DOCK2Q92608 1830 aa19.67■□□□□ 0.74
VAPA-204ENST00000577901 A0A1B0GUL7 405 aa19.66■□□□□ 0.74
VAPA-204ENST00000577901 MAP3K10Q02779 954 aa19.66■□□□□ 0.74
VAPA-204ENST00000577901 PRKCZQ05513 592 aa19.66■□□□□ 0.74
VAPA-204ENST00000577901 SPTY2D1Q68D10 685 aaPredicted RBP19.66■□□□□ 0.74
VAPA-204ENST00000577901 NKX2-3Q8TAU0 364 aa19.66■□□□□ 0.74
VAPA-204ENST00000577901 FAM163AQ96GL9 167 aaPredicted RBP19.66■□□□□ 0.74
VAPA-204ENST00000577901 NEUROD6Q96NK8 337 aa19.66■□□□□ 0.74
VAPA-204ENST00000577901 NOP58Q9Y2X3 529 aaKnown RBP19.66■□□□□ 0.74
VAPA-204ENST00000577901 AFG3L2Q9Y4W6 797 aa19.66■□□□□ 0.74
VAPA-204ENST00000577901 DDTLA6NHG4 134 aaPredicted RBP19.65■□□□□ 0.74
VAPA-204ENST00000577901 CCL5P13501 91 aa19.65■□□□□ 0.74
VAPA-204ENST00000577901 BTDP43251 543 aa19.65■□□□□ 0.74
VAPA-204ENST00000577901 PICALMQ13492 652 aa19.65■□□□□ 0.74
VAPA-204ENST00000577901 GADL1Q6ZQY3 521 aa19.65■□□□□ 0.74
VAPA-204ENST00000577901 XAGE2Q96GT9 111 aa19.65■□□□□ 0.74
VAPA-204ENST00000577901 DDX4Q9NQI0 724 aaKnown RBP19.65■□□□□ 0.74
VAPA-204ENST00000577901 BIN2Q9UBW5 565 aaPredicted RBP19.65■□□□□ 0.74
VAPA-204ENST00000577901 MYH2Q9UKX2 1941 aa19.64■□□□□ 0.74
VAPA-204ENST00000577901 CTNND1O60716 968 aaKnown RBP19.64■□□□□ 0.73
VAPA-204ENST00000577901 HMMRO75330 724 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 GJB1P08034 283 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 SLURP2P0DP57 97 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 GJA8P48165 433 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 UBXN2AP68543 259 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 SLC45A1Q9Y2W3 748 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 MROH7-TTC4A0A0A0MT08 1334 aa19.64■□□□□ 0.73
VAPA-204ENST00000577901 MECOMQ03112 1051 aa19.63■□□□□ 0.73
VAPA-204ENST00000577901 GORABQ5T7V8 394 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms