RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 VGLL4Q14135 290 aa17.01■□□□□ 0.31
GGA3-203ENST00000577435 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
GGA3-203ENST00000577435 ADGRA1Q86SQ6 560 aa17.01■□□□□ 0.31
GGA3-203ENST00000577435 NOL10Q9BSC4 688 aaKnown RBP17.01■□□□□ 0.31
GGA3-203ENST00000577435 CSADQ9Y600 493 aa17.01■□□□□ 0.31
GGA3-203ENST00000577435 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
GGA3-203ENST00000577435 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
GGA3-203ENST00000577435 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
GGA3-203ENST00000577435 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
GGA3-203ENST00000577435 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
GGA3-203ENST00000577435 TRPA1O75762 1119 aa17■□□□□ 0.31
GGA3-203ENST00000577435 IDH1O75874 414 aaKnown RBP17■□□□□ 0.31
GGA3-203ENST00000577435 GJA5P36382 358 aa17■□□□□ 0.31
GGA3-203ENST00000577435 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
GGA3-203ENST00000577435 CERS3Q8IU89 383 aa17■□□□□ 0.31
GGA3-203ENST00000577435 WRNIP1Q96S55 665 aa17■□□□□ 0.31
GGA3-203ENST00000577435 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
GGA3-203ENST00000577435 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
GGA3-203ENST00000577435 TESPA1A2RU30 521 aaPredicted RBP16.99■□□□□ 0.31
GGA3-203ENST00000577435 TBC1D12O60347 775 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 CYP7A1P22680 504 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 ERO1BQ86YB8 467 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
GGA3-203ENST00000577435 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 HAUS7Q99871 368 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 ELP3Q9H9T3 547 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 SNCAIPQ9Y6H5 919 aa16.99■□□□□ 0.31
GGA3-203ENST00000577435 SPDYE5A6NIY4 337 aa16.98■□□□□ 0.31
GGA3-203ENST00000577435 PHF20L1A8MW92 1017 aa16.98■□□□□ 0.31
GGA3-203ENST00000577435 PICALMQ13492 652 aa16.98■□□□□ 0.31
GGA3-203ENST00000577435 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
GGA3-203ENST00000577435 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
GGA3-203ENST00000577435 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
GGA3-203ENST00000577435 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
GGA3-203ENST00000577435 MS4A4AQ96JQ5 239 aa16.98■□□□□ 0.31
GGA3-203ENST00000577435 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
GGA3-203ENST00000577435 CDK5RAP2Q96SN8 1893 aa16.98■□□□□ 0.31
GGA3-203ENST00000577435 ALDH1A1P00352 501 aa16.97■□□□□ 0.31
GGA3-203ENST00000577435 INPP5BP32019 993 aa16.97■□□□□ 0.31
GGA3-203ENST00000577435 NOL9Q5SY16 702 aaKnown RBP16.97■□□□□ 0.31
GGA3-203ENST00000577435 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
GGA3-203ENST00000577435 BOLA2Q9H3K6 86 aa16.97■□□□□ 0.31
GGA3-203ENST00000577435 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
GGA3-203ENST00000577435 FOCADQ5VW36 1801 aa16.97■□□□□ 0.31
GGA3-203ENST00000577435 GOLIM4O00461 696 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 GTF2A2P52657 109 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 PPATQ06203 517 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
GGA3-203ENST00000577435 IFNL1Q8IU54 200 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.31
GGA3-203ENST00000577435 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 ECHDC1Q9NTX5 307 aa16.96■□□□□ 0.31
GGA3-203ENST00000577435 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
GGA3-203ENST00000577435 PDE6AP16499 860 aa16.95■□□□□ 0.3
GGA3-203ENST00000577435 DYNLL1P63167 89 aaKnown RBP16.95■□□□□ 0.3
GGA3-203ENST00000577435 PPIL2Q13356 520 aa16.95■□□□□ 0.3
GGA3-203ENST00000577435 SLC9C2Q5TAH2 1124 aa16.95■□□□□ 0.3
GGA3-203ENST00000577435 TNS4Q8IZW8 715 aa16.95■□□□□ 0.3
GGA3-203ENST00000577435 TGFBRAP1Q8WUH2 860 aa16.95■□□□□ 0.3
GGA3-203ENST00000577435 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
GGA3-203ENST00000577435 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
GGA3-203ENST00000577435 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
GGA3-203ENST00000577435 OTUD7BQ6GQQ9 843 aa16.94■□□□□ 0.3
GGA3-203ENST00000577435 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
GGA3-203ENST00000577435 FOXP4Q8IVH2 680 aaPredicted RBP16.94■□□□□ 0.3
GGA3-203ENST00000577435 EDC3Q96F86 508 aaKnown RBP16.94■□□□□ 0.3
GGA3-203ENST00000577435 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
GGA3-203ENST00000577435 PTPN18Q99952 460 aa16.94■□□□□ 0.3
GGA3-203ENST00000577435 RIOK1Q9BRS2 568 aaKnown RBP16.94■□□□□ 0.3
GGA3-203ENST00000577435 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
GGA3-203ENST00000577435 FLT1P17948 1338 aa16.94■□□□□ 0.3
GGA3-203ENST00000577435 TCRBV5S4A2TA0A5A2 114 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 IGF2BP3O00425 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
GGA3-203ENST00000577435 IRF6O14896 467 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 MIGA1Q8NAN2 632 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
GGA3-203ENST00000577435 KCNH4Q9UQ05 1017 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 ZNF532Q9HCE3 1301 aa16.93■□□□□ 0.3
GGA3-203ENST00000577435 MYH1P12882 1939 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 MYH7P12883 1935 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 CETPP11597 493 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 SNAPC2Q13487 334 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 EXOC6Q8TAG9 804 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 BRI3BPQ8WY22 251 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.92■□□□□ 0.34e-8■■■■□ 21.7
GGA3-203ENST00000577435 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
GGA3-203ENST00000577435 TTC41PQ6P2S7 1318 aa16.92■□□□□ 0.3
GGA3-203ENST00000577435 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
GGA3-203ENST00000577435 SLURP2P0DP57 97 aa16.91■□□□□ 0.3
GGA3-203ENST00000577435 ADD2P35612 726 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms