RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 RFX7Q2KHR2 1363 aa16.14■□□□□ 0.17
RPAIN-216ENST00000575599 DOCK2Q92608 1830 aa16.14■□□□□ 0.17
RPAIN-216ENST00000575599 WDHD1O75717 1129 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-216ENST00000575599 RHBDL3P58872 404 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 ADGRA1Q86SQ6 560 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 SLC10A4Q96EP9 437 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 IDI2Q9BXS1 227 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 AATFQ9NY61 560 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPAIN-216ENST00000575599 GOLIM4O00461 696 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 CYP7A1P22680 504 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 DCAF15Q66K64 600 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
RPAIN-216ENST00000575599 ANKRD13AQ8IZ07 590 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 MAGEB6Q8N7X4 407 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
RPAIN-216ENST00000575599 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 DDX4Q9NQI0 724 aaKnown RBP16.13■□□□□ 0.17
RPAIN-216ENST00000575599 TSKSQ9UJT2 592 aa16.13■□□□□ 0.17
RPAIN-216ENST00000575599 ENTPD3O75355 529 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 BAG3O95817 575 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 CTCFP49711 727 aaPredicted RBP16.12■□□□□ 0.17
RPAIN-216ENST00000575599 MAP3K12Q12852 859 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 TTF1Q15361 905 aaPredicted RBP16.12■□□□□ 0.17
RPAIN-216ENST00000575599 TEX11Q8IYF3 940 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 SH3RF3Q8TEJ3 882 aaPredicted RBP16.12■□□□□ 0.17
RPAIN-216ENST00000575599 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
RPAIN-216ENST00000575599 WRNIP1Q96S55 665 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 CSRNP1Q96S65 589 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 ELP3Q9H9T3 547 aa16.12■□□□□ 0.17
RPAIN-216ENST00000575599 ATP5JP18859 108 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 VGLL4Q14135 290 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.17
RPAIN-216ENST00000575599 WNK4Q96J92 1243 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 ZNF341Q9BYN7 854 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 CSADQ9Y600 493 aa16.11■□□□□ 0.17
RPAIN-216ENST00000575599 UNCXA6NJT0 531 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 IGSF3O75054 1194 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 HSPA8P11142 646 aaKnown RBP16.1■□□□□ 0.17
RPAIN-216ENST00000575599 LBX1P52954 281 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 MAP3K9P80192 1104 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 AAMPQ13685 434 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-216ENST00000575599 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 GPATCH3Q96I76 525 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 PAG1Q9NWQ8 432 aa16.1■□□□□ 0.17
RPAIN-216ENST00000575599 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-216ENST00000575599 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-216ENST00000575599 PLCG2P16885 1265 aa16.09■□□□□ 0.17
RPAIN-216ENST00000575599 DYNLL1P63167 89 aaKnown RBP16.09■□□□□ 0.17
RPAIN-216ENST00000575599 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-216ENST00000575599 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
RPAIN-216ENST00000575599 OPTNQ96CV9 577 aa16.09■□□□□ 0.17
RPAIN-216ENST00000575599 HAUS7Q99871 368 aa16.09■□□□□ 0.17
RPAIN-216ENST00000575599 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
RPAIN-216ENST00000575599 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
RPAIN-216ENST00000575599 CA12O43570 354 aa16.08■□□□□ 0.16
RPAIN-216ENST00000575599 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-216ENST00000575599 PPP4CP60510 307 aa16.08■□□□□ 0.16
RPAIN-216ENST00000575599 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.16
RPAIN-216ENST00000575599 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
RPAIN-216ENST00000575599 TGFBRAP1Q8WUH2 860 aa16.08■□□□□ 0.16
RPAIN-216ENST00000575599 ZKSCAN4Q969J2 545 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-216ENST00000575599 OSBPL5Q9H0X9 879 aaPredicted RBP16.08■□□□□ 0.16
RPAIN-216ENST00000575599 CDK5RAP2Q96SN8 1893 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 ATRNL1Q5VV63 1379 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 PDE6AP16499 860 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 GJA5P36382 358 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 SREBF2Q12772 1141 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 ANKRD45Q5TZF3 282 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 OTUD5Q96G74 571 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 SNCAIPQ9Y6H5 919 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 FOCADQ5VW36 1801 aa16.07■□□□□ 0.16
RPAIN-216ENST00000575599 FLT1P17948 1338 aa16.06■□□□□ 0.16
RPAIN-216ENST00000575599 ZNF532Q9HCE3 1301 aa16.06■□□□□ 0.16
RPAIN-216ENST00000575599 TRPA1O75762 1119 aa16.06■□□□□ 0.16
RPAIN-216ENST00000575599 SLURP2P0DP57 97 aa16.06■□□□□ 0.16
RPAIN-216ENST00000575599 INPP5BP32019 993 aa16.06■□□□□ 0.16
RPAIN-216ENST00000575599 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-216ENST00000575599 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-216ENST00000575599 COL2A1P02458 1487 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-216ENST00000575599 MANSC4A6NHS7 340 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-216ENST00000575599 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
RPAIN-216ENST00000575599 TMED8Q6PL24 325 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-216ENST00000575599 DCBLD2Q96PD2 775 aa16.05■□□□□ 0.16
RPAIN-216ENST00000575599 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPAIN-216ENST00000575599 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-216ENST00000575599 MAGEB6P1A0A0J9YX57 407 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 SPDYE5A6NIY4 337 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 FAM196BA6NMK8 535 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
RPAIN-216ENST00000575599 USP5P45974 858 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 892.3 ms