RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 HAUS7Q99871 368 aa25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 ZNF341Q9BYN7 854 aa25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 ELP3Q9H9T3 547 aa25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 ZBTB47Q9UFB7 747 aaPredicted RBP25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 CSADQ9Y600 493 aa25.16■■□□□ 1.62
HCFC1R1-208ENST00000575214 MYO5AQ9Y4I1 1855 aaKnown RBP25.15■■□□□ 1.62
HCFC1R1-208ENST00000575214 PPP4CP60510 307 aa25.15■■□□□ 1.62
HCFC1R1-208ENST00000575214 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.15■■□□□ 1.62
HCFC1R1-208ENST00000575214 GCC1Q96CN9 775 aa25.15■■□□□ 1.62
HCFC1R1-208ENST00000575214 WNK4Q96J92 1243 aa25.15■■□□□ 1.62
HCFC1R1-208ENST00000575214 NPM3O75607 178 aaKnown RBP25.14■■□□□ 1.61
HCFC1R1-208ENST00000575214 VGLL4Q14135 290 aa25.14■■□□□ 1.61
HCFC1R1-208ENST00000575214 TMED8Q6PL24 325 aaPredicted RBP25.14■■□□□ 1.61
HCFC1R1-208ENST00000575214 SH3BP5LQ7L8J4 393 aa25.14■■□□□ 1.61
HCFC1R1-208ENST00000575214 REM2Q8IYK8 340 aaPredicted RBP25.14■■□□□ 1.61
HCFC1R1-208ENST00000575214 MIGA1Q8NAN2 632 aa25.14■■□□□ 1.61
HCFC1R1-208ENST00000575214 DDTLA6NHG4 134 aaPredicted RBP25.13■■□□□ 1.61
HCFC1R1-208ENST00000575214 CA12O43570 354 aa25.13■■□□□ 1.61
HCFC1R1-208ENST00000575214 DYNLL1P63167 89 aaKnown RBP25.13■■□□□ 1.61
HCFC1R1-208ENST00000575214 IRX6P78412 446 aaPredicted RBP25.13■■□□□ 1.61
HCFC1R1-208ENST00000575214 SLC9C2Q5TAH2 1124 aa25.13■■□□□ 1.61
HCFC1R1-208ENST00000575214 ANKRD45Q5TZF3 282 aa25.13■■□□□ 1.61
HCFC1R1-208ENST00000575214 DOCK2Q92608 1830 aa25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 ZBTB48P10074 688 aaPredicted RBP25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 PDE6AP16499 860 aa25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 TSHZ3Q63HK5 1081 aa25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 OSBPL5Q9H0X9 879 aaPredicted RBP25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 RWDD1Q9H446 243 aaPredicted RBP25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 TSKSQ9UJT2 592 aa25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 AK9Q5TCS8 1911 aa25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 OTOFQ9HC10 1997 aa25.12■■□□□ 1.61
HCFC1R1-208ENST00000575214 HSPA8P11142 646 aaKnown RBP25.11■■□□□ 1.61
HCFC1R1-208ENST00000575214 COL13A1Q5TAT6 717 aaPredicted RBP25.11■■□□□ 1.61
HCFC1R1-208ENST00000575214 CERS3Q8IU89 383 aa25.11■■□□□ 1.61
HCFC1R1-208ENST00000575214 TGFBRAP1Q8WUH2 860 aa25.11■■□□□ 1.61
HCFC1R1-208ENST00000575214 ZKSCAN4Q969J2 545 aaPredicted RBP25.11■■□□□ 1.61
HCFC1R1-208ENST00000575214 OPTNQ96CV9 577 aa25.11■■□□□ 1.61
HCFC1R1-208ENST00000575214 LBX1P52954 281 aa25.1■■□□□ 1.61
HCFC1R1-208ENST00000575214 SREBF2Q12772 1141 aa25.1■■□□□ 1.61
HCFC1R1-208ENST00000575214 MAPKAPK5Q8IW41 473 aa25.1■■□□□ 1.61
HCFC1R1-208ENST00000575214 ATRNL1Q5VV63 1379 aa25.1■■□□□ 1.61
HCFC1R1-208ENST00000575214 INPP5BP32019 993 aa25.09■■□□□ 1.61
HCFC1R1-208ENST00000575214 GJA5P36382 358 aa25.09■■□□□ 1.61
HCFC1R1-208ENST00000575214 IFFO2Q5TF58 517 aa25.09■■□□□ 1.61
HCFC1R1-208ENST00000575214 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.09■■□□□ 1.61
HCFC1R1-208ENST00000575214 SNCAIPQ9Y6H5 919 aa25.09■■□□□ 1.61
HCFC1R1-208ENST00000575214 ZNF532Q9HCE3 1301 aa25.09■■□□□ 1.61
HCFC1R1-208ENST00000575214 MANSC4A6NHS7 340 aaPredicted RBP25.08■■□□□ 1.61
HCFC1R1-208ENST00000575214 OTUD7AQ8TE49 926 aaPredicted RBP25.08■■□□□ 1.61
HCFC1R1-208ENST00000575214 CNKSR2Q8WXI2 1034 aa25.08■■□□□ 1.61
HCFC1R1-208ENST00000575214 ZNF112Q9UJU3 913 aa25.08■■□□□ 1.61
HCFC1R1-208ENST00000575214 FLT1P17948 1338 aa25.08■■□□□ 1.61
HCFC1R1-208ENST00000575214 TRPA1O75762 1119 aa25.07■■□□□ 1.6
HCFC1R1-208ENST00000575214 OTUD5Q96G74 571 aa25.07■■□□□ 1.6
HCFC1R1-208ENST00000575214 RNF186Q9NXI6 227 aa25.07■■□□□ 1.6
HCFC1R1-208ENST00000575214 SAGE1Q9NXZ1 904 aa25.07■■□□□ 1.6
HCFC1R1-208ENST00000575214 TTC41PQ6P2S7 1318 aa25.07■■□□□ 1.6
HCFC1R1-208ENST00000575214 COL2A1P02458 1487 aaPredicted RBP25.07■■□□□ 1.6
HCFC1R1-208ENST00000575214 MAGEB6P1A0A0J9YX57 407 aa25.06■■□□□ 1.6
HCFC1R1-208ENST00000575214 ERC2O15083 957 aa25.06■■□□□ 1.6
HCFC1R1-208ENST00000575214 USP5P45974 858 aa25.06■■□□□ 1.6
HCFC1R1-208ENST00000575214 TM4SF4P48230 202 aa25.06■■□□□ 1.6
HCFC1R1-208ENST00000575214 TCRBV5S4A2TA0A5A2 114 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 SPDYE5A6NIY4 337 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 IGHDP01880 384 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 SLURP2P0DP57 97 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 MX1P20591 662 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 ADD2P35612 726 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 ERO1BQ86YB8 467 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 RIOK1Q9BRS2 568 aaKnown RBP25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 DHX36Q9H2U1 1008 aaKnown RBP25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 PRDM10Q9NQV6 1147 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 MAP3K10Q02779 954 aa25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.05■■□□□ 1.6
HCFC1R1-208ENST00000575214 FAM196BA6NMK8 535 aa25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 PHF20L1A8MW92 1017 aa25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 GLRX3O76003 335 aaKnown RBP25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 INHBEP58166 350 aa25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 NOL9Q5SY16 702 aaKnown RBP25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 ZSCAN25Q6NSZ9 544 aa25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 SMC5Q8IY18 1101 aa25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 SAP30BPQ9UHR5 308 aaKnown RBP25.04■■□□□ 1.6
HCFC1R1-208ENST00000575214 TBC1D12O60347 775 aa25.03■■□□□ 1.6
HCFC1R1-208ENST00000575214 SLFNL1Q499Z3 407 aa25.03■■□□□ 1.6
HCFC1R1-208ENST00000575214 B4GALNT3Q6L9W6 998 aa25.03■■□□□ 1.6
HCFC1R1-208ENST00000575214 PI4K2BQ8TCG2 481 aa25.03■■□□□ 1.6
HCFC1R1-208ENST00000575214 PI4KBQ9UBF8 816 aa25.03■■□□□ 1.6
HCFC1R1-208ENST00000575214 PALD1Q9ULE6 856 aa25.03■■□□□ 1.6
HCFC1R1-208ENST00000575214 GTF2A2P52657 109 aa25.02■■□□□ 1.6
HCFC1R1-208ENST00000575214 UBE3CQ15386 1083 aa25.02■■□□□ 1.6
HCFC1R1-208ENST00000575214 KBTBD3Q8NAB2 608 aa25.02■■□□□ 1.6
HCFC1R1-208ENST00000575214 CRNKL1Q9BZJ0 848 aaKnown RBP25.02■■□□□ 1.6
HCFC1R1-208ENST00000575214 LNPKQ9C0E8 428 aa25.02■■□□□ 1.6
HCFC1R1-208ENST00000575214 SALL3Q9BXA9 1300 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 CHGBP05060 677 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 HLA-DOAP06340 250 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 PPATQ06203 517 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 PPIL2Q13356 520 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 SLC4A8Q2Y0W8 1093 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 IFNL1Q8IU54 200 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms