RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 CHAF1AQ13111 956 aaPredicted RBP27.57■■■□□ 2
NPLOC4-217ENST00000574897 ANO6Q4KMQ2 910 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 TRAPPC3LQ5T215 181 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 MYSM1Q5VVJ2 828 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 SEPT12Q8IYM1 358 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 RTEL1Q9NZ71 1219 aa27.57■■■□□ 2
NPLOC4-217ENST00000574897 EVX2Q03828 476 aa27.56■■■□□ 2
NPLOC4-217ENST00000574897 SNW1Q13573 536 aaKnown RBP27.56■■■□□ 2
NPLOC4-217ENST00000574897 NFIXQ14938 502 aa27.56■■■□□ 2
NPLOC4-217ENST00000574897 CCDC88AQ3V6T2 1871 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 PTMAP06454 111 aaKnown RBP27.55■■■□□ 2
NPLOC4-217ENST00000574897 HSPA1LP34931 641 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 KRT40Q6A162 431 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 LUZP1Q86V48 1076 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 LINC00301Q8NCQ3 95 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 CCDC39Q9UFE4 941 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 HIBADHP31937 336 aaKnown RBP27.55■■■□□ 2
NPLOC4-217ENST00000574897 FSIP1Q8NA03 581 aa27.55■■■□□ 2
NPLOC4-217ENST00000574897 MYH6P13533 1939 aa27.54■■■□□ 2
NPLOC4-217ENST00000574897 PRDX5P30044 214 aa27.54■■■□□ 2
NPLOC4-217ENST00000574897 IARSP41252 1262 aaKnown RBP27.54■■■□□ 2
NPLOC4-217ENST00000574897 CMTR1Q8N1G2 835 aaKnown RBP27.54■■■□□ 2
NPLOC4-217ENST00000574897 NSUN4Q96CB9 384 aaKnown RBP27.54■■■□□ 2
NPLOC4-217ENST00000574897 CDKL5O76039 1030 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 MECOMQ03112 1051 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 WTAPQ15007 396 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 KLHL34Q8N239 644 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 ENGASEQ8NFI3 743 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 FAM200AQ8TCP9 573 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 SLC26A6Q9BXS9 759 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 UBR3Q6ZT12 1888 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 STK38Q15208 465 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 ANKRD2Q9GZV1 360 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 ZKSCAN5Q9Y2L8 839 aa27.53■■■□□ 2
NPLOC4-217ENST00000574897 CPLX2Q6PUV4 134 aaKnown RBP27.52■■■□□ 2
NPLOC4-217ENST00000574897 BRAPQ7Z569 592 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 CCDC82Q8N4S0 544 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 A0A087WWV3 80 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 GUCY1A2P33402 732 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 CCDC73Q6ZRK6 1079 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 CBX8Q9HC52 389 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 DUOX1Q9NRD9 1551 aa27.52■■■□□ 2
NPLOC4-217ENST00000574897 A0A1B0GVL5 298 aa27.51■■□□□ 1.99
NPLOC4-217ENST00000574897 PRDM1O75626 825 aa27.51■■□□□ 1.99
NPLOC4-217ENST00000574897 ERCC4Q92889 916 aaPredicted RBP27.51■■□□□ 1.99
NPLOC4-217ENST00000574897 DNAJC25Q9H1X3 360 aa27.51■■□□□ 1.99
NPLOC4-217ENST00000574897 SASS6Q6UVJ0 657 aa27.51■■□□□ 1.99
NPLOC4-217ENST00000574897 AATFQ9NY61 560 aaKnown RBP eCLIP27.51■■□□□ 1.99
NPLOC4-217ENST00000574897 IRS2Q9Y4H2 1338 aa27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 ZNF830Q96NB3 372 aaPredicted RBP27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 RNF41Q9H4P4 317 aaPredicted RBP27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 POLR3EQ9NVU0 708 aa27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 FAM160A1Q05DH4 1040 aa27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 GPR101Q96P66 508 aaPredicted RBP27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 ANAPC4Q9UJX5 808 aa27.5■■□□□ 1.99
NPLOC4-217ENST00000574897 SEMA3EO15041 775 aa27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 ONECUT3O60422 494 aaPredicted RBP27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 SART3Q15020 963 aaKnown RBP27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 SF3A1Q15459 793 aaKnown RBP27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 SYNE3Q6ZMZ3 975 aa27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 NUP133Q8WUM0 1156 aa27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 SPTLC2O15270 562 aa27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 CNBD1Q8NA66 436 aa27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.49■■□□□ 1.99
NPLOC4-217ENST00000574897 TNKSO95271 1327 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 ERICH2A1L162 156 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 SSRP1Q08945 709 aaKnown RBP27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 RTN1Q16799 776 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 ANO1Q5XXA6 986 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 ADALQ6DHV7 355 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 MRPS27Q92552 414 aaKnown RBP27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 YEATS4O95619 227 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 NDUFA8P51970 172 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 CTR9Q6PD62 1173 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 ZNF654Q8IZM8 581 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 UBAC1Q9BSL1 405 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 ANKIB1Q9P2G1 1089 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 MAST2Q6P0Q8 1798 aa27.48■■□□□ 1.99
NPLOC4-217ENST00000574897 KINO60870 393 aaKnown RBP27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 FMNL1O95466 1100 aaPredicted RBP27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 IFNAR1P17181 557 aa27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 SEC23AQ15436 765 aa27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 FMR1NBQ8N0W7 255 aaPredicted RBP27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 BRIP1Q9BX63 1249 aa27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 LAMB1P07942 1786 aa27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 BRWD3Q6RI45 1802 aa27.47■■□□□ 1.99
NPLOC4-217ENST00000574897 USP17L12C9JPN9 530 aa27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 USP17L21D6R901 530 aa27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 ESR2Q92731 530 aa27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 BCL11BQ9C0K0 894 aaPredicted RBP27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 TRPC5Q9UL62 973 aaPredicted RBP27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 NID2Q14112 1375 aa27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 MARCKSP29966 332 aaPredicted RBP27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 PRR5LQ6MZQ0 368 aa27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 KCNG4Q8TDN1 519 aa27.46■■□□□ 1.99
NPLOC4-217ENST00000574897 GRAPQ13588 217 aa27.45■■□□□ 1.99
NPLOC4-217ENST00000574897 GNL2Q13823 731 aaKnown RBP27.45■■□□□ 1.99
NPLOC4-217ENST00000574897 C11orf57Q6ZUT1 292 aaPredicted RBP27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms