RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CLMNQ96JQ2 1002 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 HAUS7Q99871 368 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 LNPKQ9C0E8 428 aa16.43■□□□□ 0.22
RPAIN-213ENST00000573577 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
RPAIN-213ENST00000573577 CA12O43570 354 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 WDHD1O75717 1129 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-213ENST00000573577 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
RPAIN-213ENST00000573577 GLRX3O76003 335 aaKnown RBP16.42■□□□□ 0.22
RPAIN-213ENST00000573577 RGS3P49796 1198 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 RHBDL3P58872 404 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-213ENST00000573577 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-213ENST00000573577 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 CSRNP1Q96S65 589 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 PAG1Q9NWQ8 432 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
RPAIN-213ENST00000573577 GOLIM4O00461 696 aa16.41■□□□□ 0.22
RPAIN-213ENST00000573577 ENTPD3O75355 529 aa16.41■□□□□ 0.22
RPAIN-213ENST00000573577 MAP4K4O95819 1239 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-213ENST00000573577 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
RPAIN-213ENST00000573577 SPRYD7Q5W111 196 aa16.41■□□□□ 0.22
RPAIN-213ENST00000573577 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
RPAIN-213ENST00000573577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPAIN-213ENST00000573577 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
RPAIN-213ENST00000573577 LBX1P52954 281 aa16.4■□□□□ 0.22
RPAIN-213ENST00000573577 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
RPAIN-213ENST00000573577 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-213ENST00000573577 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
RPAIN-213ENST00000573577 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-213ENST00000573577 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
RPAIN-213ENST00000573577 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPAIN-213ENST00000573577 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
RPAIN-213ENST00000573577 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
RPAIN-213ENST00000573577 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-213ENST00000573577 OTOFQ9HC10 1997 aa16.4■□□□□ 0.22
RPAIN-213ENST00000573577 BAG3O95817 575 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 ZBTB48P10074 688 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-213ENST00000573577 PDE1AP54750 535 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 PICALMQ13492 652 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 VGLL4Q14135 290 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-213ENST00000573577 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-213ENST00000573577 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 SAGE1Q9NXZ1 904 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
RPAIN-213ENST00000573577 SREBF2Q12772 1141 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-213ENST00000573577 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPAIN-213ENST00000573577 CSADQ9Y600 493 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 ATRNL1Q5VV63 1379 aa16.38■□□□□ 0.21
RPAIN-213ENST00000573577 PLCG2P16885 1265 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 CYP7A1P22680 504 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 PPP4CP60510 307 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 LRRFIP1Q32MZ4 808 aaKnown RBP16.37■□□□□ 0.21
RPAIN-213ENST00000573577 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-213ENST00000573577 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
RPAIN-213ENST00000573577 COL2A1P02458 1487 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-213ENST00000573577 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
RPAIN-213ENST00000573577 DDTLA6NHG4 134 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-213ENST00000573577 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-213ENST00000573577 GJA5P36382 358 aa16.36■□□□□ 0.21
RPAIN-213ENST00000573577 TM4SF4P48230 202 aa16.36■□□□□ 0.21
RPAIN-213ENST00000573577 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
RPAIN-213ENST00000573577 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-213ENST00000573577 EDC3Q96F86 508 aaKnown RBP16.36■□□□□ 0.21
RPAIN-213ENST00000573577 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
RPAIN-213ENST00000573577 TRPA1O75762 1119 aa16.35■□□□□ 0.21
RPAIN-213ENST00000573577 PDE6AP16499 860 aa16.35■□□□□ 0.21
RPAIN-213ENST00000573577 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
RPAIN-213ENST00000573577 KBTBD3Q8NAB2 608 aa16.35■□□□□ 0.21
RPAIN-213ENST00000573577 OSBPL5Q9H0X9 879 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-213ENST00000573577 OSBPL3Q9H4L5 887 aa16.35■□□□□ 0.21
RPAIN-213ENST00000573577 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
RPAIN-213ENST00000573577 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
RPAIN-213ENST00000573577 INHBEP58166 350 aa16.34■□□□□ 0.21
RPAIN-213ENST00000573577 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
RPAIN-213ENST00000573577 LAMB1P07942 1786 aa16.33■□□□□ 0.21
RPAIN-213ENST00000573577 ZFYP08048 801 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-213ENST00000573577 INPP5BP32019 993 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
RPAIN-213ENST00000573577 MAP3K10Q02779 954 aa16.33■□□□□ 0.2
RPAIN-213ENST00000573577 UBE3CQ15386 1083 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms