RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 HUNKP57058 714 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 RHBDL3P58872 404 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 FKBP1CQ5VVH2 108 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 FAM83AQ86UY5 434 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 C2orf69Q8N8R5 385 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 NOL10Q9BSC4 688 aaKnown RBP19.18■□□□□ 0.66
CHD3-215ENST00000572750 FAM198AQ9UFP1 575 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 BRCA2P51587 3418 aa19.18■□□□□ 0.66
CHD3-215ENST00000572750 CENPFP49454 3210 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 RGS3P49796 1198 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 NOGQ13253 232 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 PICALMQ13492 652 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 TTLL12Q14166 644 aaPredicted RBP19.17■□□□□ 0.66
CHD3-215ENST00000572750 SLC9C2Q5TAH2 1124 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 MIGA1Q8NAN2 632 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 SH3RF3Q8TEJ3 882 aaPredicted RBP19.17■□□□□ 0.66
CHD3-215ENST00000572750 DDX4Q9NQI0 724 aaKnown RBP19.17■□□□□ 0.66
CHD3-215ENST00000572750 NAV1Q8NEY1 1877 aa19.17■□□□□ 0.66
CHD3-215ENST00000572750 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
CHD3-215ENST00000572750 ERC2O15083 957 aa19.16■□□□□ 0.66
CHD3-215ENST00000572750 GLRX3O76003 335 aaKnown RBP19.16■□□□□ 0.66
CHD3-215ENST00000572750 CHGBP05060 677 aa19.16■□□□□ 0.66
CHD3-215ENST00000572750 DYNLL1P63167 89 aaKnown RBP19.16■□□□□ 0.66
CHD3-215ENST00000572750 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
CHD3-215ENST00000572750 ZNF532Q9HCE3 1301 aa19.16■□□□□ 0.66
CHD3-215ENST00000572750 IGSF3O75054 1194 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 BAG3O95817 575 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 NEFLP07196 543 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 PDE1AP54750 535 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 HABP4Q5JVS0 413 aaKnown RBP19.15■□□□□ 0.66
CHD3-215ENST00000572750 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 FAM151AQ8WW52 585 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 IDI2Q9BXS1 227 aa19.15■□□□□ 0.66
CHD3-215ENST00000572750 A0A0C4DFX4 3053 aa19.14■□□□□ 0.66
CHD3-215ENST00000572750 SIPA1L1O43166 1804 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 TCRBV5S4A2TA0A5A2 114 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 UBE2Q2LH0YL09 131 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 FKBP1BP68106 108 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 SUPT20HL1Q3ZLR7 823 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.14■□□□□ 0.651e-6■■■□□ 16.4
CHD3-215ENST00000572750 RNF186Q9NXI6 227 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 SAGE1Q9NXZ1 904 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 STAP2Q9UGK3 403 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 ANGEL1Q9UNK9 670 aaKnown RBP19.14■□□□□ 0.65
CHD3-215ENST00000572750 HPS5Q9UPZ3 1129 aa19.14■□□□□ 0.65
CHD3-215ENST00000572750 TRPA1O75762 1119 aa19.13■□□□□ 0.65
CHD3-215ENST00000572750 ADD2P35612 726 aa19.13■□□□□ 0.65
CHD3-215ENST00000572750 PPP4CP60510 307 aa19.13■□□□□ 0.65
CHD3-215ENST00000572750 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
CHD3-215ENST00000572750 MYH1P12882 1939 aa19.12■□□□□ 0.65
CHD3-215ENST00000572750 ENTPD3O75355 529 aa19.12■□□□□ 0.65
CHD3-215ENST00000572750 PLCG2P16885 1265 aa19.12■□□□□ 0.65
CHD3-215ENST00000572750 KIF23Q02241 960 aaPredicted RBP19.12■□□□□ 0.65
CHD3-215ENST00000572750 TMED8Q6PL24 325 aaPredicted RBP19.12■□□□□ 0.65
CHD3-215ENST00000572750 SH3BP5LQ7L8J4 393 aa19.12■□□□□ 0.65
CHD3-215ENST00000572750 ARMC9Q7Z3E5 817 aa19.12■□□□□ 0.65
CHD3-215ENST00000572750 COL2A1P02458 1487 aaPredicted RBP19.11■□□□□ 0.65
CHD3-215ENST00000572750 ATRNL1Q5VV63 1379 aa19.11■□□□□ 0.65
CHD3-215ENST00000572750 FLT1P17948 1338 aa19.11■□□□□ 0.65
CHD3-215ENST00000572750 PPP1R12BO60237 982 aaPredicted RBP19.11■□□□□ 0.65
CHD3-215ENST00000572750 CTU1Q7Z7A3 348 aaKnown RBP19.11■□□□□ 0.65
CHD3-215ENST00000572750 MAPKAPK5Q8IW41 473 aa19.11■□□□□ 0.65
CHD3-215ENST00000572750 ZSCAN29Q8IWY8 852 aaPredicted RBP19.11■□□□□ 0.65
CHD3-215ENST00000572750 TGFBRAP1Q8WUH2 860 aa19.11■□□□□ 0.65
CHD3-215ENST00000572750 CSRNP1Q96S65 589 aa19.11■□□□□ 0.65
CHD3-215ENST00000572750 RIOK1Q9BRS2 568 aaKnown RBP19.11■□□□□ 0.65
CHD3-215ENST00000572750 OSBPL5Q9H0X9 879 aaPredicted RBP19.11■□□□□ 0.65
CHD3-215ENST00000572750 MAGEB6P1A0A0J9YX57 407 aa19.1■□□□□ 0.65
CHD3-215ENST00000572750 DDTLA6NHG4 134 aaPredicted RBP19.1■□□□□ 0.65
CHD3-215ENST00000572750 PDE4AP27815 886 aa19.1■□□□□ 0.65
CHD3-215ENST00000572750 RGMBQ6NW40 437 aa19.1■□□□□ 0.65
CHD3-215ENST00000572750 PLEKHM2Q8IWE5 1019 aa19.1■□□□□ 0.65
CHD3-215ENST00000572750 LCORLQ8N3X6 602 aa19.1■□□□□ 0.65
CHD3-215ENST00000572750 FSD1Q9BTV5 496 aa19.1■□□□□ 0.65
CHD3-215ENST00000572750 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
CHD3-215ENST00000572750 USP2O75604 605 aaPredicted RBP19.09■□□□□ 0.65
CHD3-215ENST00000572750 MBD4O95243 580 aa19.09■□□□□ 0.65
CHD3-215ENST00000572750 ZNF157P51786 506 aaPredicted RBP19.09■□□□□ 0.65
CHD3-215ENST00000572750 ZSCAN25Q6NSZ9 544 aa19.09■□□□□ 0.65
CHD3-215ENST00000572750 MIGA2Q7L4E1 593 aa19.09■□□□□ 0.65
CHD3-215ENST00000572750 RASAL3Q86YV0 1011 aa19.09■□□□□ 0.65
CHD3-215ENST00000572750 ARMT1Q9H993 441 aa19.09■□□□□ 0.65
CHD3-215ENST00000572750 NPM3O75607 178 aaKnown RBP19.08■□□□□ 0.64
CHD3-215ENST00000572750 SLURP2P0DP57 97 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 IREB2P48200 963 aaKnown RBP19.08■□□□□ 0.64
CHD3-215ENST00000572750 UBE3CQ15386 1083 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 MAP3K11Q16584 847 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 SLC4A8Q2Y0W8 1093 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 CERS3Q8IU89 383 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 HOOK2Q96ED9 719 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 CLMNQ96JQ2 1002 aa19.08■□□□□ 0.64
CHD3-215ENST00000572750 BAZ2AQ9UIF9 1905 aaKnown RBP19.08■□□□□ 0.64
CHD3-215ENST00000572750 DOCK1Q14185 1865 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 LAMB1P07942 1786 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 SLC10A3P09131 477 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 USP5P45974 858 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 DCAF15Q66K64 600 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 WRNIP1Q96S55 665 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms