RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PRO3102Q9H379 93 aa16.36■□□□□ 0.21
CCDC40-205ENST00000571028 PDHXO00330 501 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 IFIT1P09914 478 aaKnown RBP16.35■□□□□ 0.21
CCDC40-205ENST00000571028 SLC5A1P13866 664 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 GYG1P46976 350 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 MNX1P50219 401 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-205ENST00000571028 CACNB3P54284 484 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 FCGRTP55899 365 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 UBE4AQ14139 1066 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 PUM3Q15397 648 aaKnown RBP16.35■□□□□ 0.21
CCDC40-205ENST00000571028 ATP2B3Q16720 1220 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 UBE2Q1Q7Z7E8 422 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 ANKRD23Q86SG2 305 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 SLAIN1Q8ND83 568 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 TEKT1Q969V4 418 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
CCDC40-205ENST00000571028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
CCDC40-205ENST00000571028 TIMM10P62072 90 aa16.34■□□□□ 0.21
CCDC40-205ENST00000571028 PPATQ06203 517 aa16.34■□□□□ 0.21
CCDC40-205ENST00000571028 CHAF1AQ13111 956 aaPredicted RBP16.34■□□□□ 0.21
CCDC40-205ENST00000571028 PARK7Q99497 189 aaKnown RBP16.34■□□□□ 0.21
CCDC40-205ENST00000571028 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
CCDC40-205ENST00000571028 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.21
CCDC40-205ENST00000571028 NEFLP07196 543 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 CTGFP29279 349 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 PRKCZQ05513 592 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 LPIN2Q92539 896 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 LRCH3Q96II8 777 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
CCDC40-205ENST00000571028 IQSEC3Q9UPP2 1182 aaPredicted RBP16.33■□□□□ 0.2
CCDC40-205ENST00000571028 SOX1O00570 391 aaPredicted RBP16.32■□□□□ 0.2
CCDC40-205ENST00000571028 TFRCP02786 760 aaKnown RBP16.32■□□□□ 0.2
CCDC40-205ENST00000571028 FGFR2P21802 821 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 ADORA1P30542 326 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 BCAMP50895 628 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 HDLBPQ00341 1268 aaKnown RBP16.32■□□□□ 0.2
CCDC40-205ENST00000571028 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 FAM83AQ86UY5 434 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 AKAP2Q9Y2D5 859 aa16.32■□□□□ 0.2
CCDC40-205ENST00000571028 A0A1B0GUL7 405 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 SGPL1O95470 568 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 FAM84BQ96KN1 310 aaPredicted RBP16.31■□□□□ 0.2
CCDC40-205ENST00000571028 UNC93B1Q9H1C4 597 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 STAP2Q9UGK3 403 aa16.31■□□□□ 0.2
CCDC40-205ENST00000571028 MAST3O60307 1309 aa16.3■□□□□ 0.2
CCDC40-205ENST00000571028 SMARCA5O60264 1052 aaPredicted RBP16.3■□□□□ 0.2
CCDC40-205ENST00000571028 CAPN2P17655 700 aa16.3■□□□□ 0.2
CCDC40-205ENST00000571028 TNNI3KQ59H18 835 aa16.3■□□□□ 0.2
CCDC40-205ENST00000571028 CCDC8Q9H0W5 538 aaPredicted RBP16.3■□□□□ 0.2
CCDC40-205ENST00000571028 FPGT-TNNI3KV9GXZ4 949 aa16.3■□□□□ 0.2
CCDC40-205ENST00000571028 ADCY3O60266 1144 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 INPP5BP32019 993 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 AAMPQ13685 434 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 FKBP1CQ5VVH2 108 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 AACSQ86V21 672 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 DEFB123Q8N688 67 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 DEFB118Q96PH6 123 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
CCDC40-205ENST00000571028 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
CCDC40-205ENST00000571028 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
CCDC40-205ENST00000571028 ADGRA2Q96PE1 1338 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 IGHDP01880 384 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 INHAP05111 366 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 GRIK5Q16478 980 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 KIF1BPQ96EK5 621 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 DCTPP1Q9H773 170 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 KCNH4Q9UQ05 1017 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
CCDC40-205ENST00000571028 A0A0C4DFX4 3053 aa16.27■□□□□ 0.2
CCDC40-205ENST00000571028 CYP2C8P10632 490 aa16.27■□□□□ 0.2
CCDC40-205ENST00000571028 PHKA1P46020 1223 aa16.27■□□□□ 0.2
CCDC40-205ENST00000571028 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
CCDC40-205ENST00000571028 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
CCDC40-205ENST00000571028 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
CCDC40-205ENST00000571028 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.2
CCDC40-205ENST00000571028 GABRQQ9UN88 632 aa16.27■□□□□ 0.2
CCDC40-205ENST00000571028 COL6A3P12111 3177 aa16.27■□□□□ 0.19
CCDC40-205ENST00000571028 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
CCDC40-205ENST00000571028 BCRP11274 1271 aa16.26■□□□□ 0.19
CCDC40-205ENST00000571028 ELNP15502 786 aa16.26■□□□□ 0.19
CCDC40-205ENST00000571028 FLT3LGP49771 235 aa16.26■□□□□ 0.19
CCDC40-205ENST00000571028 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
CCDC40-205ENST00000571028 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
CCDC40-205ENST00000571028 GPR153Q6NV75 609 aa16.26■□□□□ 0.19
CCDC40-205ENST00000571028 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
CCDC40-205ENST00000571028 TLR7Q9NYK1 1049 aaKnown RBP16.26■□□□□ 0.19
CCDC40-205ENST00000571028 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms