RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 ANTXR1Q9H6X2 564 aa15.45■□□□□ 0.06
TVP23B-204ENST00000571018 NDUFB9Q9Y6M9 179 aa15.45■□□□□ 0.06
TVP23B-204ENST00000571018 IDH1O75874 414 aaKnown RBP15.44■□□□□ 0.06
TVP23B-204ENST00000571018 BAG3O95817 575 aa15.44■□□□□ 0.06
TVP23B-204ENST00000571018 TM4SF4P48230 202 aa15.44■□□□□ 0.06
TVP23B-204ENST00000571018 PPP4CP60510 307 aa15.44■□□□□ 0.06
TVP23B-204ENST00000571018 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
TVP23B-204ENST00000571018 NOL10Q9BSC4 688 aaKnown RBP15.44■□□□□ 0.06
TVP23B-204ENST00000571018 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
TVP23B-204ENST00000571018 DDX4Q9NQI0 724 aaKnown RBP15.44■□□□□ 0.06
TVP23B-204ENST00000571018 RNF186Q9NXI6 227 aa15.44■□□□□ 0.06
TVP23B-204ENST00000571018 SAGE1Q9NXZ1 904 aa15.44■□□□□ 0.06
TVP23B-204ENST00000571018 SMARCA5O60264 1052 aaPredicted RBP15.43■□□□□ 0.06
TVP23B-204ENST00000571018 ATP5JP18859 108 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 MAP3K12Q12852 859 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 PICALMQ13492 652 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 AAMPQ13685 434 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 VGLL4Q14135 290 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
TVP23B-204ENST00000571018 TMED8Q6PL24 325 aaPredicted RBP15.43■□□□□ 0.06
TVP23B-204ENST00000571018 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 SH3BP5LQ7L8J4 393 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 ADGRA1Q86SQ6 560 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 WRNIP1Q96S55 665 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 ZNF341Q9BYN7 854 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 ELP3Q9H9T3 547 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.43■□□□□ 0.06
TVP23B-204ENST00000571018 TSKSQ9UJT2 592 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 CSADQ9Y600 493 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 MAST2Q6P0Q8 1798 aa15.43■□□□□ 0.06
TVP23B-204ENST00000571018 ATRNL1Q5VV63 1379 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 DDTLA6NHG4 134 aaPredicted RBP15.42■□□□□ 0.06
TVP23B-204ENST00000571018 MANSC4A6NHS7 340 aaPredicted RBP15.42■□□□□ 0.06
TVP23B-204ENST00000571018 TRPA1O75762 1119 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 PLCG2P16885 1265 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 CYP7A1P22680 504 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 GJA5P36382 358 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 INHBEP58166 350 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 SREBF2Q12772 1141 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 ZSCAN29Q8IWY8 852 aaPredicted RBP15.42■□□□□ 0.06
TVP23B-204ENST00000571018 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
TVP23B-204ENST00000571018 AATFQ9NY61 560 aaKnown RBP eCLIP15.42■□□□□ 0.06
TVP23B-204ENST00000571018 ZNF112Q9UJU3 913 aa15.42■□□□□ 0.06
TVP23B-204ENST00000571018 MAP3K10Q02779 954 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 TEX11Q8IYF3 940 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 MAGEB6Q8N7X4 407 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 ZKSCAN4Q969J2 545 aaPredicted RBP15.41■□□□□ 0.06
TVP23B-204ENST00000571018 OPTNQ96CV9 577 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 SNCAIPQ9Y6H5 919 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 PCNTO95613 3336 aa15.41■□□□□ 0.06
TVP23B-204ENST00000571018 SPDYE5A6NIY4 337 aa15.4■□□□□ 0.06
TVP23B-204ENST00000571018 GOLIM4O00461 696 aa15.4■□□□□ 0.06
TVP23B-204ENST00000571018 CHRDL2Q6WN34 429 aa15.4■□□□□ 0.06
TVP23B-204ENST00000571018 DNAJC2Q99543 621 aaKnown RBP15.4■□□□□ 0.06
TVP23B-204ENST00000571018 HAUS7Q99871 368 aa15.4■□□□□ 0.06
TVP23B-204ENST00000571018 OSBPL5Q9H0X9 879 aaPredicted RBP15.4■□□□□ 0.06
TVP23B-204ENST00000571018 BOLA2Q9H3K6 86 aa15.4■□□□□ 0.06
TVP23B-204ENST00000571018 MYO5AQ9Y4I1 1855 aaKnown RBP15.4■□□□□ 0.06
TVP23B-204ENST00000571018 COL2A1P02458 1487 aaPredicted RBP15.4■□□□□ 0.06
TVP23B-204ENST00000571018 DOCK2Q92608 1830 aa15.39■□□□□ 0.05
TVP23B-204ENST00000571018 TESPA1A2RU30 521 aaPredicted RBP15.39■□□□□ 0.05
TVP23B-204ENST00000571018 INPP5BP32019 993 aa15.39■□□□□ 0.05
TVP23B-204ENST00000571018 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
TVP23B-204ENST00000571018 ERO1BQ86YB8 467 aa15.39■□□□□ 0.05
TVP23B-204ENST00000571018 CERS3Q8IU89 383 aa15.39■□□□□ 0.05
TVP23B-204ENST00000571018 ECHDC1Q9NTX5 307 aa15.39■□□□□ 0.05
TVP23B-204ENST00000571018 PAG1Q9NWQ8 432 aa15.39■□□□□ 0.05
TVP23B-204ENST00000571018 SUPT16HQ9Y5B9 1047 aaKnown RBP15.39■□□□□ 0.05
TVP23B-204ENST00000571018 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 TBC1D12O60347 775 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 DYNLL1P63167 89 aaKnown RBP15.38■□□□□ 0.05
TVP23B-204ENST00000571018 NOL9Q5SY16 702 aaKnown RBP15.38■□□□□ 0.05
TVP23B-204ENST00000571018 SLC9C2Q5TAH2 1124 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 EDC3Q96F86 508 aaKnown RBP15.38■□□□□ 0.05
TVP23B-204ENST00000571018 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 LAMB1P07942 1786 aa15.38■□□□□ 0.05
TVP23B-204ENST00000571018 ALDH1A1P00352 501 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 PDE6AP16499 860 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 PPATQ06203 517 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 IFNL1Q8IU54 200 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 TNS4Q8IZW8 715 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 MIGA1Q8NAN2 632 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 CFHR5Q9BXR6 569 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
TVP23B-204ENST00000571018 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
TVP23B-204ENST00000571018 TCRBV5S4A2TA0A5A2 114 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
TVP23B-204ENST00000571018 SLURP2P0DP57 97 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 GTF2A2P52657 109 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 PPIL2Q13356 520 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 MAPKAPK5Q8IW41 473 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 EXOC6Q8TAG9 804 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 GCC1Q96CN9 775 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 GPATCH3Q96I76 525 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 RIOK1Q9BRS2 568 aaKnown RBP15.36■□□□□ 0.05
TVP23B-204ENST00000571018 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
TVP23B-204ENST00000571018 FLT1P17948 1338 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms