RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 EMP3P54852 163 aa15.26■□□□□ 0.03
CTDNEP1-205ENST00000570828 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
CTDNEP1-205ENST00000570828 NOM1Q5C9Z4 860 aaKnown RBP15.26■□□□□ 0.03
CTDNEP1-205ENST00000570828 DCAF15Q66K64 600 aa15.26■□□□□ 0.03
CTDNEP1-205ENST00000570828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.26■□□□□ 0.033e-14■■□□□ 12.2
CTDNEP1-205ENST00000570828 CFHR5Q9BXR6 569 aa15.26■□□□□ 0.03
CTDNEP1-205ENST00000570828 GJA5P36382 358 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 OS9Q13438 667 aaPredicted RBP15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 GSE1Q14687 1217 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 SPTY2D1Q68D10 685 aaPredicted RBP15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 SLF2Q8IX21 1173 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 WRNIP1Q96S55 665 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 C1orf115Q9H7X2 142 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 ABCF2Q9UG63 623 aa15.25■□□□□ 0.03
CTDNEP1-205ENST00000570828 IGF2BP3O00425 579 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTDNEP1-205ENST00000570828 TCP10Q12799 353 aa15.24■□□□□ 0.03
CTDNEP1-205ENST00000570828 FAM151AQ8WW52 585 aa15.24■□□□□ 0.03
CTDNEP1-205ENST00000570828 USP40Q9NVE5 1235 aa15.24■□□□□ 0.03
CTDNEP1-205ENST00000570828 MYH13Q9UKX3 1938 aa15.23■□□□□ 0.03
CTDNEP1-205ENST00000570828 FKTNO75072 461 aa15.23■□□□□ 0.03
CTDNEP1-205ENST00000570828 RLBP1P12271 317 aa15.23■□□□□ 0.03
CTDNEP1-205ENST00000570828 NFIAQ12857 509 aa15.23■□□□□ 0.03
CTDNEP1-205ENST00000570828 ZNF341Q9BYN7 854 aa15.23■□□□□ 0.03
CTDNEP1-205ENST00000570828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-205ENST00000570828 GAKO14976 1311 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 GTF2A2P52657 109 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 ERICH6Q7L0X2 663 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 SSH3Q8TE77 659 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 R3HDMLQ9H3Y0 253 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 SNCAIPQ9Y6H5 919 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
CTDNEP1-205ENST00000570828 CCL15-CCL14A0A0B4J2E2 113 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 TESPA1A2RU30 521 aaPredicted RBP15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 SPDYE5A6NIY4 337 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 SURF6O75683 361 aaKnown RBP15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 CCL15Q16663 113 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 MIGA2Q7L4E1 593 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 ERO1BQ86YB8 467 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 SPATA5Q8NB90 893 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 FAM198AQ9UFP1 575 aa15.21■□□□□ 0.03
CTDNEP1-205ENST00000570828 MROH7-TTC4A0A0A0MT08 1334 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 ZBTB7BO15156 539 aaPredicted RBP15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 UQCRFS1P1P0C7P4 283 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 MS4A1P11836 297 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 BTDP43251 543 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 MECOMQ03112 1051 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 CRHR2Q13324 411 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 TNNI3KQ59H18 835 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 PI16Q6UXB8 463 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 MS4A4AQ96JQ5 239 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 PTPN18Q99952 460 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 GPR108Q9NPR9 543 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 FPGT-TNNI3KV9GXZ4 949 aa15.2■□□□□ 0.02
CTDNEP1-205ENST00000570828 ENTPD3O75355 529 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 RGS3P49796 1198 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 GSTO1P78417 241 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 TTC39AQ5SRH9 613 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 IFNLR1Q8IU57 520 aaPredicted RBP15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 BRI3BPQ8WY22 251 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 IDI2Q9BXS1 227 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 RFX7Q2KHR2 1363 aa15.19■□□□□ 0.02
CTDNEP1-205ENST00000570828 WDHD1O75717 1129 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 CETPP11597 493 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 INPP5BP32019 993 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 MCAMP43121 646 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 PPIL2Q13356 520 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 SNAPC2Q13487 334 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 HPS5Q9UPZ3 1129 aa15.18■□□□□ 0.02
CTDNEP1-205ENST00000570828 IRF6O14896 467 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 LDHCP07864 332 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 PPATQ06203 517 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 PICALMQ13492 652 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 TAF1CQ15572 869 aaPredicted RBP15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 CEP85Q6P2H3 762 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 FBXO46Q6PJ61 603 aaPredicted RBP15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 NSUN4Q96CB9 384 aaKnown RBP15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 DBNDD2Q9BQY9 259 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 LRP2BPQ9P2M1 347 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 ZNF112Q9UJU3 913 aa15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 NOP58Q9Y2X3 529 aaKnown RBP15.17■□□□□ 0.02
CTDNEP1-205ENST00000570828 LAMB1P07942 1786 aa15.16■□□□□ 0.02
CTDNEP1-205ENST00000570828 GPR75-ASB3A0A0A6YYF3 556 aa15.16■□□□□ 0.02
CTDNEP1-205ENST00000570828 MLLT1Q03111 559 aaPredicted RBP15.16■□□□□ 0.02
CTDNEP1-205ENST00000570828 ZFPM1Q8IX07 1006 aa15.16■□□□□ 0.02
CTDNEP1-205ENST00000570828 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms