RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 GPR161Q8N6U8 529 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 PLIN2Q99541 437 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 SLF1Q9BQI6 1058 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 FAN1Q9Y2M0 1017 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 CMA1P23946 247 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 CYP2C19P33261 490 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 UBAC1Q9BSL1 405 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 DEF6Q9H4E7 631 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 ERCC3P19447 782 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 IL15P40933 162 aaPredicted RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 IFIT5Q13325 482 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 ZNF274Q96GC6 653 aaPredicted RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 PSMB7Q99436 277 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 CDC5LQ99459 802 aaKnown RBP11.34□□□□□ -0.59
USP43-203ENST00000570827 JADE2Q9NQC1 790 aa11.34□□□□□ -0.59
USP43-203ENST00000570827 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 ENC1O14682 589 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
USP43-203ENST00000570827 BABAM1Q9NWV8 329 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 TECPR2O15040 1411 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
USP43-203ENST00000570827 HDXQ7Z353 690 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 ENGASEQ8NFI3 743 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 OVOS2A0A0J9YW53 1432 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 OVOS2Q6IE36 1432 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 MRPS25P82663 173 aaKnown RBP11.33□□□□□ -0.6
USP43-203ENST00000570827 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
USP43-203ENST00000570827 CTDSPL2Q05D32 466 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 POSTNQ15063 836 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
USP43-203ENST00000570827 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
USP43-203ENST00000570827 A0A1W2PQ27 194 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 A0A1W2PQ64 194 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 A0A1W2PQD8 194 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 MYO1CO00159 1063 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 TADA3O75528 432 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 XBP1P17861 261 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 TTC19Q6DKK2 380 aaPredicted RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 RBM43Q6ZSC3 357 aaKnown RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 ARHGEF25Q86VW2 580 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 CCDC148Q8NFR7 591 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 BLZF1Q9H2G9 400 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 TMOD3Q9NYL9 352 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 DSCC1Q9BVC3 393 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 SLC52A2Q9HAB3 445 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 COPRSQ9NQ92 184 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 ANGEL1Q9UNK9 670 aaKnown RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 RRP15Q9Y3B9 282 aaKnown RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 ZNF609O15014 1411 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 EYA2O00167 538 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 VSTM4Q8IW00 320 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
USP43-203ENST00000570827 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
USP43-203ENST00000570827 CYP27B1O15528 508 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 SLC39A14Q15043 492 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 ZNF174Q15697 407 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 TTC31Q49AM3 519 aaPredicted RBP11.31□□□□□ -0.6
USP43-203ENST00000570827 SLC35F6Q8N357 371 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 LRP2BPQ9P2M1 347 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 MAGEC2Q9UBF1 373 aaPredicted RBP11.31□□□□□ -0.6
USP43-203ENST00000570827 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
USP43-203ENST00000570827 H2AFXP16104 143 aaPredicted RBP11.31□□□□□ -0.6
USP43-203ENST00000570827 CCDC181Q5TID7 509 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 KIF6Q6ZMV9 814 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 ZCRB1Q8TBF4 217 aaKnown RBP11.31□□□□□ -0.6
USP43-203ENST00000570827 CTNND2Q9UQB3 1225 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 AKAP2Q9Y2D5 859 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
USP43-203ENST00000570827 VWA3AA6NCI4 1184 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 TUBB4AP04350 444 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 TXLNAP40222 546 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 MNAT1P51948 309 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
USP43-203ENST00000570827 NR5A1Q13285 461 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 ZMYM1Q5SVZ6 1142 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 ABCB6Q9NP58 842 aa11.3□□□□□ -0.6
USP43-203ENST00000570827 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms