RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 TTF1Q15361 905 aaPredicted RBP13.57□□□□□ -0.24
SMG6-206ENST00000570668 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 SH3BP5LQ7L8J4 393 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 ADGRA1Q86SQ6 560 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 WRNIP1Q96S55 665 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 NOL10Q9BSC4 688 aaKnown RBP13.57□□□□□ -0.24
SMG6-206ENST00000570668 TSKSQ9UJT2 592 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 CSADQ9Y600 493 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 ATRNL1Q5VV63 1379 aa13.57□□□□□ -0.24
SMG6-206ENST00000570668 DOCK2Q92608 1830 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 DDTLA6NHG4 134 aaPredicted RBP13.56□□□□□ -0.24
SMG6-206ENST00000570668 MANSC4A6NHS7 340 aaPredicted RBP13.56□□□□□ -0.24
SMG6-206ENST00000570668 TRPA1O75762 1119 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 PLCG2P16885 1265 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 GJA5P36382 358 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 MAP3K10Q02779 954 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 MAP3K12Q12852 859 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 PICALMQ13492 652 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 TEX11Q8IYF3 940 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 OPTNQ96CV9 577 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 BCL11AQ9H165 835 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 ELP3Q9H9T3 547 aa13.56□□□□□ -0.24
SMG6-206ENST00000570668 AATFQ9NY61 560 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMG6-206ENST00000570668 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
SMG6-206ENST00000570668 CYP7A1P22680 504 aa13.55□□□□□ -0.24
SMG6-206ENST00000570668 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
SMG6-206ENST00000570668 MAGEB6Q8N7X4 407 aa13.55□□□□□ -0.24
SMG6-206ENST00000570668 SH3RF3Q8TEJ3 882 aaPredicted RBP13.55□□□□□ -0.24
SMG6-206ENST00000570668 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
SMG6-206ENST00000570668 DNAJC2Q99543 621 aaKnown RBP13.55□□□□□ -0.24
SMG6-206ENST00000570668 HAUS7Q99871 368 aa13.55□□□□□ -0.24
SMG6-206ENST00000570668 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.55□□□□□ -0.24
SMG6-206ENST00000570668 SNCAIPQ9Y6H5 919 aa13.55□□□□□ -0.24
SMG6-206ENST00000570668 LAMB1P07942 1786 aa13.55□□□□□ -0.24
SMG6-206ENST00000570668 SPDYE5A6NIY4 337 aa13.54□□□□□ -0.24
SMG6-206ENST00000570668 GOLIM4O00461 696 aa13.54□□□□□ -0.24
SMG6-206ENST00000570668 INPP5BP32019 993 aa13.54□□□□□ -0.24
SMG6-206ENST00000570668 HDAC1Q13547 482 aaPredicted RBP13.54□□□□□ -0.24
SMG6-206ENST00000570668 ERO1BQ86YB8 467 aa13.54□□□□□ -0.24
SMG6-206ENST00000570668 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
SMG6-206ENST00000570668 OSBPL5Q9H0X9 879 aaPredicted RBP13.54□□□□□ -0.24
SMG6-206ENST00000570668 BOLA2Q9H3K6 86 aa13.54□□□□□ -0.24
SMG6-206ENST00000570668 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
SMG6-206ENST00000570668 PHF20L1A8MW92 1017 aa13.53□□□□□ -0.24
SMG6-206ENST00000570668 TBC1D12O60347 775 aa13.53□□□□□ -0.24
SMG6-206ENST00000570668 NOL9Q5SY16 702 aaKnown RBP13.53□□□□□ -0.24
SMG6-206ENST00000570668 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
SMG6-206ENST00000570668 MS4A4AQ96JQ5 239 aa13.53□□□□□ -0.24
SMG6-206ENST00000570668 ECHDC1Q9NTX5 307 aa13.53□□□□□ -0.24
SMG6-206ENST00000570668 PAG1Q9NWQ8 432 aa13.53□□□□□ -0.24
SMG6-206ENST00000570668 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
SMG6-206ENST00000570668 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.24
SMG6-206ENST00000570668 ALDH1A1P00352 501 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 PDE6AP16499 860 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 DYNLL1P63167 89 aaKnown RBP13.52□□□□□ -0.25
SMG6-206ENST00000570668 PPATQ06203 517 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 SLC9C2Q5TAH2 1124 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 TGFBRAP1Q8WUH2 860 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 CFHR5Q9BXR6 569 aa13.52□□□□□ -0.25
SMG6-206ENST00000570668 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.25
SMG6-206ENST00000570668 CDK5RAP2Q96SN8 1893 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 FLT1P17948 1338 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMG6-206ENST00000570668 SLURP2P0DP57 97 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 GTF2A2P52657 109 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 PPIL2Q13356 520 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
SMG6-206ENST00000570668 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 GCC1Q96CN9 775 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 RIOK1Q9BRS2 568 aaKnown RBP13.51□□□□□ -0.25
SMG6-206ENST00000570668 PI4KBQ9UBF8 816 aa13.51□□□□□ -0.25
SMG6-206ENST00000570668 FOCADQ5VW36 1801 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 ZNF532Q9HCE3 1301 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 IRF6O14896 467 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
SMG6-206ENST00000570668 TBC1D8O95759 1140 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 ADD2P35612 726 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 EXOC6Q8TAG9 804 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 BRI3BPQ8WY22 251 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 PTPN18Q99952 460 aa13.5□□□□□ -0.25
SMG6-206ENST00000570668 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMG6-206ENST00000570668 HERC5Q9UII4 1024 aaKnown RBP13.5□□□□□ -0.25
SMG6-206ENST00000570668 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 CCL15-CCL14A0A0B4J2E2 113 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 SNAPC2Q13487 334 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 CCL15Q16663 113 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 OTUD7BQ6GQQ9 843 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
SMG6-206ENST00000570668 FOXP4Q8IVH2 680 aaPredicted RBP13.49□□□□□ -0.25
SMG6-206ENST00000570668 SCYL3Q8IZE3 742 aa13.49□□□□□ -0.25
SMG6-206ENST00000570668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMG6-206ENST00000570668 KCNH4Q9UQ05 1017 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms