RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.69■■■□□ 2.02
SLC12A4-205ENST00000570616 OTUD7AQ8TE49 926 aaPredicted RBP27.69■■■□□ 2.02
SLC12A4-205ENST00000570616 WBP1LQ9NX94 342 aa27.69■■■□□ 2.02
SLC12A4-205ENST00000570616 SALL3Q9BXA9 1300 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 ERC2O15083 957 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 MX1P20591 662 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 SH3BP5LQ7L8J4 393 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 CLMNQ96JQ2 1002 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 CSRNP1Q96S65 589 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 ZIC5Q96T25 663 aa27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.68■■■□□ 2.023e-7■□□□□ 10.9
SLC12A4-205ENST00000570616 MYO5AQ9Y4I1 1855 aaKnown RBP27.68■■■□□ 2.02
SLC12A4-205ENST00000570616 ZSCAN29Q8IWY8 852 aaPredicted RBP27.67■■■□□ 2.02
SLC12A4-205ENST00000570616 MIGA1Q8NAN2 632 aa27.67■■■□□ 2.02
SLC12A4-205ENST00000570616 SLC10A4Q96EP9 437 aa27.67■■■□□ 2.02
SLC12A4-205ENST00000570616 ZNF341Q9BYN7 854 aa27.67■■■□□ 2.02
SLC12A4-205ENST00000570616 OSBPL5Q9H0X9 879 aaPredicted RBP27.67■■■□□ 2.02
SLC12A4-205ENST00000570616 TCRBV5S4A2TA0A5A2 114 aa27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 DDTLA6NHG4 134 aaPredicted RBP27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 GLRX3O76003 335 aaKnown RBP27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 DYNLL1P63167 89 aaKnown RBP27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 MAP3K9P80192 1104 aa27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 KIF23Q02241 960 aaPredicted RBP27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 MIGA2Q7L4E1 593 aa27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 PI4K2BQ8TCG2 481 aa27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 ZNF532Q9HCE3 1301 aa27.66■■■□□ 2.02
SLC12A4-205ENST00000570616 VGLL4Q14135 290 aa27.65■■■□□ 2.02
SLC12A4-205ENST00000570616 SPRYD7Q5W111 196 aa27.65■■■□□ 2.02
SLC12A4-205ENST00000570616 AIDAQ96BJ3 306 aa27.65■■■□□ 2.02
SLC12A4-205ENST00000570616 WRNIP1Q96S55 665 aa27.65■■■□□ 2.02
SLC12A4-205ENST00000570616 ADD2P35612 726 aa27.64■■■□□ 2.02
SLC12A4-205ENST00000570616 TGFBRAP1Q8WUH2 860 aa27.64■■■□□ 2.02
SLC12A4-205ENST00000570616 RIOK1Q9BRS2 568 aaKnown RBP27.64■■■□□ 2.02
SLC12A4-205ENST00000570616 CSADQ9Y600 493 aa27.64■■■□□ 2.02
SLC12A4-205ENST00000570616 FLT1P17948 1338 aa27.64■■■□□ 2.01
SLC12A4-205ENST00000570616 ZBTB48P10074 688 aaPredicted RBP27.63■■■□□ 2.01
SLC12A4-205ENST00000570616 REM2Q8IYK8 340 aaPredicted RBP27.63■■■□□ 2.01
SLC12A4-205ENST00000570616 KBTBD3Q8NAB2 608 aa27.63■■■□□ 2.01
SLC12A4-205ENST00000570616 LNPKQ9C0E8 428 aa27.63■■■□□ 2.01
SLC12A4-205ENST00000570616 ZNF112Q9UJU3 913 aa27.63■■■□□ 2.01
SLC12A4-205ENST00000570616 OTOFQ9HC10 1997 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 MAGEB6P1A0A0J9YX57 407 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 MAP3K10Q02779 954 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 NUCB1Q02818 461 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 UBE3CQ15386 1083 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 ZSCAN25Q6NSZ9 544 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 CHD1LQ86WJ1 897 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 WNK4Q96J92 1243 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 BEGAINQ9BUH8 593 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 STAP2Q9UGK3 403 aa27.62■■■□□ 2.01
SLC12A4-205ENST00000570616 B4GALNT3Q6L9W6 998 aa27.61■■■□□ 2.01
SLC12A4-205ENST00000570616 MAPKAPK5Q8IW41 473 aa27.61■■■□□ 2.01
SLC12A4-205ENST00000570616 DHX36Q9H2U1 1008 aaKnown RBP27.61■■■□□ 2.01
SLC12A4-205ENST00000570616 ELP3Q9H9T3 547 aa27.61■■■□□ 2.01
SLC12A4-205ENST00000570616 PDE1AP54750 535 aa27.6■■■□□ 2.01
SLC12A4-205ENST00000570616 MKRN3Q13064 507 aaKnown RBP27.6■■■□□ 2.01
SLC12A4-205ENST00000570616 SNCAIPQ9Y6H5 919 aa27.6■■■□□ 2.01
SLC12A4-205ENST00000570616 FOXN1O15353 648 aa27.59■■■□□ 2.01
SLC12A4-205ENST00000570616 CA12O43570 354 aa27.59■■■□□ 2.01
SLC12A4-205ENST00000570616 TBC1D12O60347 775 aa27.59■■■□□ 2.01
SLC12A4-205ENST00000570616 OPTNQ96CV9 577 aa27.59■■■□□ 2.01
SLC12A4-205ENST00000570616 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.59■■■□□ 2.01
SLC12A4-205ENST00000570616 INPP5BP32019 993 aa27.58■■■□□ 2.01
SLC12A4-205ENST00000570616 USP5P45974 858 aa27.58■■■□□ 2.01
SLC12A4-205ENST00000570616 NOL9Q5SY16 702 aaKnown RBP27.58■■■□□ 2.01
SLC12A4-205ENST00000570616 ZKSCAN4Q969J2 545 aaPredicted RBP27.58■■■□□ 2.01
SLC12A4-205ENST00000570616 SPDYE5A6NIY4 337 aa27.57■■■□□ 2
SLC12A4-205ENST00000570616 PHF20L1A8MW92 1017 aa27.57■■■□□ 2
SLC12A4-205ENST00000570616 GJA5P36382 358 aa27.57■■■□□ 2
SLC12A4-205ENST00000570616 SREBF2Q12772 1141 aa27.57■■■□□ 2
SLC12A4-205ENST00000570616 SLFNL1Q499Z3 407 aa27.57■■■□□ 2
SLC12A4-205ENST00000570616 CRNKL1Q9BZJ0 848 aaKnown RBP27.57■■■□□ 2
SLC12A4-205ENST00000570616 PI4KBQ9UBF8 816 aa27.57■■■□□ 2
SLC12A4-205ENST00000570616 MANSC4A6NHS7 340 aaPredicted RBP27.56■■■□□ 2
SLC12A4-205ENST00000570616 CHGBP05060 677 aa27.56■■■□□ 2
SLC12A4-205ENST00000570616 ZFYP08048 801 aaPredicted RBP27.56■■■□□ 2
SLC12A4-205ENST00000570616 CTCFP49711 727 aaPredicted RBP27.56■■■□□ 2
SLC12A4-205ENST00000570616 ERO1BQ86YB8 467 aa27.56■■■□□ 2
SLC12A4-205ENST00000570616 LCORLQ8N3X6 602 aa27.56■■■□□ 2
SLC12A4-205ENST00000570616 HERC5Q9UII4 1024 aaKnown RBP27.56■■■□□ 2
SLC12A4-205ENST00000570616 FOCADQ5VW36 1801 aa27.55■■■□□ 2
SLC12A4-205ENST00000570616 PCNTO95613 3336 aa27.55■■■□□ 2
SLC12A4-205ENST00000570616 TM4SF4P48230 202 aa27.55■■■□□ 2
SLC12A4-205ENST00000570616 LRRFIP1Q32MZ4 808 aaKnown RBP27.55■■■□□ 2
SLC12A4-205ENST00000570616 CNKSR2Q8WXI2 1034 aa27.55■■■□□ 2
SLC12A4-205ENST00000570616 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.55■■■□□ 2
SLC12A4-205ENST00000570616 SAGE1Q9NXZ1 904 aa27.55■■■□□ 2
SLC12A4-205ENST00000570616 PALD1Q9ULE6 856 aa27.55■■■□□ 2
SLC12A4-205ENST00000570616 MBD4O95243 580 aa27.54■■■□□ 2
SLC12A4-205ENST00000570616 SLURP2P0DP57 97 aa27.54■■■□□ 2
SLC12A4-205ENST00000570616 OTUD5Q96G74 571 aa27.54■■■□□ 2
SLC12A4-205ENST00000570616 ARMT1Q9H993 441 aa27.54■■■□□ 2
SLC12A4-205ENST00000570616 SAP30BPQ9UHR5 308 aaKnown RBP27.54■■■□□ 2
SLC12A4-205ENST00000570616 RNF113AO15541 343 aaKnown RBP27.53■■■□□ 2
SLC12A4-205ENST00000570616 HLA-DOAP06340 250 aa27.53■■■□□ 2
SLC12A4-205ENST00000570616 INHBEP58166 350 aa27.53■■■□□ 2
SLC12A4-205ENST00000570616 METTL16Q86W50 562 aaKnown RBP27.53■■■□□ 2
SLC12A4-205ENST00000570616 APPBP2Q92624 585 aa27.53■■■□□ 2
SLC12A4-205ENST00000570616 AK9Q5TCS8 1911 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms