RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 TET3O43151 1660 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 PLCD1P51178 756 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 CDC42BPAQ5VT25 1732 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
CIITA-204ENST00000570546 ADCK5Q3MIX3 580 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 TTC6Q86TZ1 520 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 HAUS7Q99871 368 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 ARHGAP6O43182 974 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 MYSM1Q5VVJ2 828 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 USP28Q96RU2 1077 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 TTC38Q5R3I4 469 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
CIITA-204ENST00000570546 LPIN2Q92539 896 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 JAG2Q9Y219 1238 aa17.31■□□□□ 0.36
CIITA-204ENST00000570546 PLCG2P16885 1265 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 PNOCQ13519 176 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 CUL4AQ13619 759 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 SH3TC1Q8TE82 1336 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 TUBB2AQ13885 445 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 TUBB2BQ9BVA1 445 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 KCNJ14Q9UNX9 436 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 ADCY9O60503 1353 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 PARP1P09874 1014 aaKnown RBP17.3■□□□□ 0.36
CIITA-204ENST00000570546 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 KIAA1468Q9P260 1216 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 CHMP4BP1P59074 171 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 MAP4K1Q92918 833 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 NOC4LQ9BVI4 516 aaKnown RBP17.3■□□□□ 0.36
CIITA-204ENST00000570546 INCENPQ9NQS7 918 aa17.3■□□□□ 0.36
CIITA-204ENST00000570546 LETM2Q2VYF4 491 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 SPECC1LQ69YQ0 1117 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 SV2BQ7L1I2 683 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 PFKFB1P16118 471 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 LTKP29376 864 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 PAK1Q13153 545 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 MTX1Q13505 466 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 CCDC155Q8N6L0 562 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 CDK12Q9NYV4 1490 aaPredicted RBP17.29■□□□□ 0.36
CIITA-204ENST00000570546 KRT13P13646 458 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 MAP3K4Q9Y6R4 1608 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 TAF5LO75529 589 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 CTNNA2P26232 953 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 PPP1R2P41236 205 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 SMARCC2Q8TAQ2 1214 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 TSC1Q92574 1164 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 MLH3Q9UHC1 1453 aa17.29■□□□□ 0.36
CIITA-204ENST00000570546 HOOK3Q86VS8 718 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 RASAL2Q9UJF2 1139 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 IGSF1Q8N6C5 1336 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 HSPD1P10809 573 aaKnown RBP17.28■□□□□ 0.36
CIITA-204ENST00000570546 PDE4DQ08499 809 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 MAPK8IP1Q9UQF2 711 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 ZCCHC11Q5TAX3 1644 aaKnown RBP17.28■□□□□ 0.36
CIITA-204ENST00000570546 LRMPQ12912 555 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
CIITA-204ENST00000570546 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 PRPHP41219 470 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
CIITA-204ENST00000570546 PRDM1O75626 825 aa17.28■□□□□ 0.36
CIITA-204ENST00000570546 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
CIITA-204ENST00000570546 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
CIITA-204ENST00000570546 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
CIITA-204ENST00000570546 TRAF1Q13077 416 aa17.27■□□□□ 0.36
CIITA-204ENST00000570546 IFT81Q8WYA0 676 aa17.27■□□□□ 0.36
CIITA-204ENST00000570546 EFCAB6Q5THR3 1501 aa17.27■□□□□ 0.36
CIITA-204ENST00000570546 UBE4AQ14139 1066 aa17.27■□□□□ 0.35
CIITA-204ENST00000570546 PPP2R5BQ15173 497 aa17.27■□□□□ 0.35
CIITA-204ENST00000570546 TRMT44Q8IYL2 757 aaKnown RBP17.27■□□□□ 0.35
CIITA-204ENST00000570546 ATRIPQ8WXE1 791 aa17.27■□□□□ 0.35
CIITA-204ENST00000570546 PHKG2P15735 406 aa17.27■□□□□ 0.35
CIITA-204ENST00000570546 VAV2P52735 878 aa17.27■□□□□ 0.35
CIITA-204ENST00000570546 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
CIITA-204ENST00000570546 SCRN1Q12765 414 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 PLVAPQ9BX97 442 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
CIITA-204ENST00000570546 SERTAD1Q9UHV2 236 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 ATP2C2O75185 946 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
CIITA-204ENST00000570546 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
CIITA-204ENST00000570546 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 TMTC1Q8IUR5 882 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 LRRC8AQ8IWT6 810 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 MRFAP1L1Q96HT8 127 aa17.26■□□□□ 0.35
CIITA-204ENST00000570546 UNC13BO14795 1591 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 PROSER3Q2NL68 480 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 CNNM4Q6P4Q7 775 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 FAM76AQ8TAV0 307 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 JAKMIP2Q96AA8 810 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 BICD1Q96G01 975 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 BTG4Q9NY30 223 aa17.25■□□□□ 0.35
CIITA-204ENST00000570546 TAB2Q9NYJ8 693 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms