RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
CNOT1-220ENST00000569916 OPTNQ96CV9 577 aa15.92■□□□□ 0.14
CNOT1-220ENST00000569916 ZNF341Q9BYN7 854 aa15.92■□□□□ 0.14
CNOT1-220ENST00000569916 SNCAIPQ9Y6H5 919 aa15.92■□□□□ 0.14
CNOT1-220ENST00000569916 MYH7P12883 1935 aa15.92■□□□□ 0.14
CNOT1-220ENST00000569916 MANSC4A6NHS7 340 aaPredicted RBP15.91■□□□□ 0.14
CNOT1-220ENST00000569916 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
CNOT1-220ENST00000569916 MAP4K4O95819 1239 aaPredicted RBP15.91■□□□□ 0.14
CNOT1-220ENST00000569916 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
CNOT1-220ENST00000569916 IFFO2Q5TF58 517 aa15.91■□□□□ 0.14
CNOT1-220ENST00000569916 ZKSCAN4Q969J2 545 aaPredicted RBP15.91■□□□□ 0.14
CNOT1-220ENST00000569916 ANTXR1Q9H6X2 564 aa15.91■□□□□ 0.14
CNOT1-220ENST00000569916 CSADQ9Y600 493 aa15.91■□□□□ 0.14
CNOT1-220ENST00000569916 ATAD5Q96QE3 1844 aa15.91■□□□□ 0.14
CNOT1-220ENST00000569916 DDTLA6NHG4 134 aaPredicted RBP15.9■□□□□ 0.14
CNOT1-220ENST00000569916 SPDYE5A6NIY4 337 aa15.9■□□□□ 0.14
CNOT1-220ENST00000569916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.9■□□□□ 0.14
CNOT1-220ENST00000569916 CRBNQ96SW2 442 aa15.9■□□□□ 0.14
CNOT1-220ENST00000569916 LRRCC1Q9C099 1032 aa15.9■□□□□ 0.14
CNOT1-220ENST00000569916 DCTPP1Q9H773 170 aa15.9■□□□□ 0.14
CNOT1-220ENST00000569916 AATFQ9NY61 560 aaKnown RBP eCLIP15.9■□□□□ 0.14
CNOT1-220ENST00000569916 ZNF112Q9UJU3 913 aa15.9■□□□□ 0.14
CNOT1-220ENST00000569916 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
CNOT1-220ENST00000569916 PHIPQ8WWQ0 1821 aa15.89■□□□□ 0.13
CNOT1-220ENST00000569916 DDX60LQ5H9U9 1706 aaKnown RBP15.89■□□□□ 0.13
CNOT1-220ENST00000569916 IDH1O75874 414 aaKnown RBP15.89■□□□□ 0.13
CNOT1-220ENST00000569916 INPP5BP32019 993 aa15.89■□□□□ 0.13
CNOT1-220ENST00000569916 IFNL1Q8IU54 200 aa15.89■□□□□ 0.13
CNOT1-220ENST00000569916 SH3RF3Q8TEJ3 882 aaPredicted RBP15.89■□□□□ 0.13
CNOT1-220ENST00000569916 NOL10Q9BSC4 688 aaKnown RBP15.89■□□□□ 0.13
CNOT1-220ENST00000569916 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
CNOT1-220ENST00000569916 MYH1P12882 1939 aa15.89■□□□□ 0.13
CNOT1-220ENST00000569916 TESPA1A2RU30 521 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-220ENST00000569916 IGF2BP3O00425 579 aaKnown RBP eCLIP15.88■□□□□ 0.13
CNOT1-220ENST00000569916 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-220ENST00000569916 BAG3O95817 575 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 INHBEP58166 350 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 PPP4CP60510 307 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 ERO1BQ86YB8 467 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 ZSCAN29Q8IWY8 852 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-220ENST00000569916 TEX11Q8IYF3 940 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 OTUD5Q96G74 571 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 CFHR5Q9BXR6 569 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 OSBPL5Q9H0X9 879 aaPredicted RBP15.88■□□□□ 0.13
CNOT1-220ENST00000569916 NAV1Q8NEY1 1877 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 PTPRFP10586 1907 aa15.88■□□□□ 0.13
CNOT1-220ENST00000569916 TBC1D8O95759 1140 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 SLURP2P0DP57 97 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 PLCG2P16885 1265 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 CYP7A1P22680 504 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 MAP3K10Q02779 954 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 NOL9Q5SY16 702 aaKnown RBP15.87■□□□□ 0.13
CNOT1-220ENST00000569916 MAGEB6Q8N7X4 407 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
CNOT1-220ENST00000569916 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 ALDH1A1P00352 501 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 ATP5JP18859 108 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 DYNLL1P63167 89 aaKnown RBP15.86■□□□□ 0.13
CNOT1-220ENST00000569916 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 PPIL2Q13356 520 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 TTF1Q15361 905 aaPredicted RBP15.86■□□□□ 0.13
CNOT1-220ENST00000569916 TMED8Q6PL24 325 aaPredicted RBP15.86■□□□□ 0.13
CNOT1-220ENST00000569916 DNAJC2Q99543 621 aaKnown RBP15.86■□□□□ 0.13
CNOT1-220ENST00000569916 PTPN18Q99952 460 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 FLT1P17948 1338 aa15.86■□□□□ 0.13
CNOT1-220ENST00000569916 GOLIM4O00461 696 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 GTF2A2P52657 109 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 PPATQ06203 517 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 MIGA1Q8NAN2 632 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 BRI3BPQ8WY22 251 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 EDC3Q96F86 508 aaKnown RBP15.85■□□□□ 0.13
CNOT1-220ENST00000569916 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
CNOT1-220ENST00000569916 CCL15-CCL14A0A0B4J2E2 113 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 IRF6O14896 467 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 TBC1D12O60347 775 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 CCL15Q16663 113 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 NOM1Q5C9Z4 860 aaKnown RBP15.84■□□□□ 0.13
CNOT1-220ENST00000569916 MAPKAPK5Q8IW41 473 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 TGFBRAP1Q8WUH2 860 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 HAUS7Q99871 368 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 PAG1Q9NWQ8 432 aa15.84■□□□□ 0.13
CNOT1-220ENST00000569916 FAM196BA6NMK8 535 aa15.83■□□□□ 0.12
CNOT1-220ENST00000569916 GPR25O00155 361 aa15.83■□□□□ 0.12
CNOT1-220ENST00000569916 PDE6AP16499 860 aa15.83■□□□□ 0.12
CNOT1-220ENST00000569916 CERS3Q8IU89 383 aa15.83■□□□□ 0.12
CNOT1-220ENST00000569916 SCYL3Q8IZE3 742 aa15.83■□□□□ 0.12
CNOT1-220ENST00000569916 ZNF296Q8WUU4 475 aaPredicted RBP15.83■□□□□ 0.12
CNOT1-220ENST00000569916 TCRBV5S4A2TA0A5A2 114 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 CETPP11597 493 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 SNAPC2Q13487 334 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 SLC9C2Q5TAH2 1124 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 OTUD7BQ6GQQ9 843 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 RIOK1Q9BRS2 568 aaKnown RBP15.82■□□□□ 0.12
CNOT1-220ENST00000569916 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 KCNH4Q9UQ05 1017 aa15.82■□□□□ 0.12
CNOT1-220ENST00000569916 LOC285556D6RIA3 1793 aa15.81■□□□□ 0.12
CNOT1-220ENST00000569916 CTNND1O60716 968 aaKnown RBP15.81■□□□□ 0.12
CNOT1-220ENST00000569916 CRHR2Q13324 411 aa15.81■□□□□ 0.12
CNOT1-220ENST00000569916 DGKZQ13574 1117 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms