RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 TBC1D9Q6ZT07 1266 aa27.69■■■□□ 2.02
RBFOX1-219ENST00000569895 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.69■■■□□ 2.02
RBFOX1-219ENST00000569895 C1orf115Q9H7X2 142 aa27.69■■■□□ 2.02
RBFOX1-219ENST00000569895 FPGT-TNNI3KV9GXZ4 949 aa27.69■■■□□ 2.02
RBFOX1-219ENST00000569895 TLR2O60603 784 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 RLBP1P12271 317 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 MCAMP43121 646 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 PICALMQ13492 652 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 PI16Q6UXB8 463 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 NSUN4Q96CB9 384 aaKnown RBP27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 PICK1Q9NRD5 415 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 KCNH4Q9UQ05 1017 aa27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 NOP58Q9Y2X3 529 aaKnown RBP27.68■■■□□ 2.02
RBFOX1-219ENST00000569895 NPM3O75607 178 aaKnown RBP27.67■■■□□ 2.02
RBFOX1-219ENST00000569895 KIF22Q14807 665 aa27.67■■■□□ 2.02
RBFOX1-219ENST00000569895 NOL10Q9BSC4 688 aaKnown RBP27.67■■■□□ 2.02
RBFOX1-219ENST00000569895 MYH2Q9UKX2 1941 aa27.67■■■□□ 2.02
RBFOX1-219ENST00000569895 CXCL11O14625 94 aa27.66■■■□□ 2.02
RBFOX1-219ENST00000569895 MAP3K10Q02779 954 aa27.66■■■□□ 2.02
RBFOX1-219ENST00000569895 ANKRD23Q86SG2 305 aa27.66■■■□□ 2.02
RBFOX1-219ENST00000569895 AK9Q5TCS8 1911 aa27.65■■■□□ 2.02
RBFOX1-219ENST00000569895 PHF20L1A8MW92 1017 aa27.65■■■□□ 2.02
RBFOX1-219ENST00000569895 RHBDL3P58872 404 aa27.65■■■□□ 2.02
RBFOX1-219ENST00000569895 SH3BP5LQ7L8J4 393 aa27.65■■■□□ 2.02
RBFOX1-219ENST00000569895 SCYL3Q8IZE3 742 aa27.65■■■□□ 2.02
RBFOX1-219ENST00000569895 DDX4Q9NQI0 724 aaKnown RBP27.65■■■□□ 2.02
RBFOX1-219ENST00000569895 RFX7Q2KHR2 1363 aa27.64■■■□□ 2.02
RBFOX1-219ENST00000569895 DDTLA6NHG4 134 aaPredicted RBP27.64■■■□□ 2.02
RBFOX1-219ENST00000569895 IGSF3O75054 1194 aa27.64■■■□□ 2.02
RBFOX1-219ENST00000569895 ZNF384Q8TF68 577 aa27.64■■■□□ 2.02
RBFOX1-219ENST00000569895 DBNDD2Q9BQY9 259 aa27.64■■■□□ 2.02
RBFOX1-219ENST00000569895 ATRNL1Q5VV63 1379 aa27.63■■■□□ 2.01
RBFOX1-219ENST00000569895 CTNND1O60716 968 aaKnown RBP27.63■■■□□ 2.01
RBFOX1-219ENST00000569895 BAG3O95817 575 aa27.63■■■□□ 2.01
RBFOX1-219ENST00000569895 ZNF512BQ96KM6 892 aaPredicted RBP27.63■■■□□ 2.01
RBFOX1-219ENST00000569895 ZHX2Q9Y6X8 837 aa27.63■■■□□ 2.01
RBFOX1-219ENST00000569895 PDHXO00330 501 aa27.62■■■□□ 2.01
RBFOX1-219ENST00000569895 TBC1D12O60347 775 aa27.62■■■□□ 2.01
RBFOX1-219ENST00000569895 NAA16Q6N069 864 aaPredicted RBP27.62■■■□□ 2.01
RBFOX1-219ENST00000569895 SNRKQ9NRH2 765 aa27.62■■■□□ 2.01
RBFOX1-219ENST00000569895 GNRH1P01148 92 aa27.61■■■□□ 2.01
RBFOX1-219ENST00000569895 PLCG2P16885 1265 aa27.61■■■□□ 2.01
RBFOX1-219ENST00000569895 PTPRAP18433 802 aa27.61■■■□□ 2.01
RBFOX1-219ENST00000569895 FASTKD5Q7L8L6 764 aaKnown RBP27.61■■■□□ 2.01
RBFOX1-219ENST00000569895 PANK1Q8TE04 598 aa27.61■■■□□ 2.01
RBFOX1-219ENST00000569895 CEP85Q6P2H3 762 aa27.6■■■□□ 2.01
RBFOX1-219ENST00000569895 NBPF11Q86T75 865 aa27.6■■■□□ 2.01
RBFOX1-219ENST00000569895 ERC1Q8IUD2 1116 aa27.6■■■□□ 2.01
RBFOX1-219ENST00000569895 LACTBP83111 547 aaPredicted RBP27.59■■■□□ 2.01
RBFOX1-219ENST00000569895 TEX11Q8IYF3 940 aa27.59■■■□□ 2.01
RBFOX1-219ENST00000569895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.59■■■□□ 2.01
RBFOX1-219ENST00000569895 HSP90AB4PQ58FF6 505 aa27.58■■■□□ 2.01
RBFOX1-219ENST00000569895 C17orf99Q6UX52 265 aa27.58■■■□□ 2.01
RBFOX1-219ENST00000569895 ARMC5Q96C12 935 aa27.58■■■□□ 2.01
RBFOX1-219ENST00000569895 PARK7Q99497 189 aaKnown RBP27.58■■■□□ 2.01
RBFOX1-219ENST00000569895 OSBPL5Q9H0X9 879 aaPredicted RBP27.58■■■□□ 2.01
RBFOX1-219ENST00000569895 CYP2E1P05181 493 aaPredicted RBP27.57■■■□□ 2
RBFOX1-219ENST00000569895 CCDC8Q9H0W5 538 aaPredicted RBP27.57■■■□□ 2
RBFOX1-219ENST00000569895 AFG3L2Q9Y4W6 797 aa27.57■■■□□ 2
RBFOX1-219ENST00000569895 A0A0G2JLL6 359 aaPredicted RBP27.56■■■□□ 2
RBFOX1-219ENST00000569895 PRMT2P55345 433 aa27.56■■■□□ 2
RBFOX1-219ENST00000569895 CAP1Q01518 475 aa27.56■■■□□ 2
RBFOX1-219ENST00000569895 MOGSQ13724 837 aa27.56■■■□□ 2
RBFOX1-219ENST00000569895 PRRT2Q7Z6L0 340 aaPredicted RBP27.56■■■□□ 2
RBFOX1-219ENST00000569895 EAF2Q96CJ1 260 aaPredicted RBP27.56■■■□□ 2
RBFOX1-219ENST00000569895 DHX36Q9H2U1 1008 aaKnown RBP27.56■■■□□ 2
RBFOX1-219ENST00000569895 CHMP4BQ9H444 224 aaKnown RBP27.56■■■□□ 2
RBFOX1-219ENST00000569895 AATFQ9NY61 560 aaKnown RBP eCLIP27.56■■■□□ 2
RBFOX1-219ENST00000569895 CPA4Q9UI42 421 aa27.56■■■□□ 2
RBFOX1-219ENST00000569895 DBNLQ9UJU6 430 aaKnown RBP27.56■■■□□ 2
RBFOX1-219ENST00000569895 ZAP70P43403 619 aa27.55■■■□□ 2
RBFOX1-219ENST00000569895 PPP4CP60510 307 aa27.55■■■□□ 2
RBFOX1-219ENST00000569895 SLC9C1Q4G0N8 1177 aa27.55■■■□□ 2
RBFOX1-219ENST00000569895 COL2A1P02458 1487 aaPredicted RBP27.54■■■□□ 2
RBFOX1-219ENST00000569895 HOXD10P28358 340 aa27.54■■■□□ 2
RBFOX1-219ENST00000569895 GPAT2Q6NUI2 795 aa27.54■■■□□ 2
RBFOX1-219ENST00000569895 SH3RF3Q8TEJ3 882 aaPredicted RBP27.54■■■□□ 2
RBFOX1-219ENST00000569895 TMEM106CQ9BVX2 250 aa27.54■■■□□ 2
RBFOX1-219ENST00000569895 PI4KBQ9UBF8 816 aa27.54■■■□□ 2
RBFOX1-219ENST00000569895 HERC5Q9UII4 1024 aaKnown RBP27.54■■■□□ 2
RBFOX1-219ENST00000569895 PTCH2Q9Y6C5 1203 aa27.54■■■□□ 2
RBFOX1-219ENST00000569895 DOCK2Q92608 1830 aa27.53■■■□□ 2
RBFOX1-219ENST00000569895 GADL1Q6ZQY3 521 aa27.53■■■□□ 2
RBFOX1-219ENST00000569895 TBC1D2Q9BYX2 928 aa27.53■■■□□ 2
RBFOX1-219ENST00000569895 DDX19BQ9UMR2 479 aa27.53■■■□□ 2
RBFOX1-219ENST00000569895 EXOC6BQ9Y2D4 811 aa27.53■■■□□ 2
RBFOX1-219ENST00000569895 SLC45A1Q9Y2W3 748 aa27.53■■■□□ 2
RBFOX1-219ENST00000569895 HMMRO75330 724 aa27.52■■■□□ 2
RBFOX1-219ENST00000569895 SLURP2P0DP57 97 aa27.52■■■□□ 2
RBFOX1-219ENST00000569895 RPAP2Q8IXW5 612 aaPredicted RBP27.52■■■□□ 2
RBFOX1-219ENST00000569895 ARHGAP39Q9C0H5 1083 aa27.52■■■□□ 2
RBFOX1-219ENST00000569895 TLR7Q9NYK1 1049 aaKnown RBP27.52■■■□□ 2
RBFOX1-219ENST00000569895 TRIM75PA6NK02 468 aa27.51■■□□□ 1.99
RBFOX1-219ENST00000569895 PSMC4P43686 418 aa27.51■■□□□ 1.99
RBFOX1-219ENST00000569895 AACSQ86V21 672 aa27.51■■□□□ 1.99
RBFOX1-219ENST00000569895 CERS3Q8IU89 383 aa27.51■■□□□ 1.99
RBFOX1-219ENST00000569895 TGFBRAP1Q8WUH2 860 aa27.51■■□□□ 1.99
RBFOX1-219ENST00000569895 PIH1D3Q9NQM4 214 aaKnown RBP27.51■■□□□ 1.99
RBFOX1-219ENST00000569895 FMNL1O95466 1100 aaPredicted RBP27.5■■□□□ 1.99
RBFOX1-219ENST00000569895 TMED8Q6PL24 325 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms