RNA–Protein interactions for RNA: ENST00000569706.5

RHOT2-223, Transcript of ras homolog family member T2, human

TSL 3

Gene RHOT2, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT2-223	ENST00000569706	RHBDL3	P58872	404 aa		29.33	■■■□□ 2.29
RHOT2-223	ENST00000569706	DDX4	Q9NQI0	724 aa	Known RBP	29.33	■■■□□ 2.29
RHOT2-223	ENST00000569706	HMG20B	Q9P0W2	317 aa		29.33	■■■□□ 2.29
RHOT2-223	ENST00000569706	ABCF2	Q9UG63	623 aa		29.33	■■■□□ 2.29
RHOT2-223	ENST00000569706	PTCH2	Q9Y6C5	1203 aa		29.33	■■■□□ 2.29
RHOT2-223	ENST00000569706	CXCL11	O14625	94 aa		29.32	■■■□□ 2.28
RHOT2-223	ENST00000569706	GNRH1	P01148	92 aa		29.32	■■■□□ 2.28
RHOT2-223	ENST00000569706	MECOM	Q03112	1051 aa		29.31	■■■□□ 2.28
RHOT2-223	ENST00000569706	ARHGAP39	Q9C0H5	1083 aa		29.31	■■■□□ 2.28
RHOT2-223	ENST00000569706	DDTL	A6NHG4	134 aa	Predicted RBP	29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	PDHX	O00330	501 aa		29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	MAP4K4	O95819	1239 aa	Predicted RBP	29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	BTD	P43251	543 aa		29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	POLA2	Q14181	598 aa		29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	ERICH6	Q7L0X2	663 aa		29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	SCYL3	Q8IZE3	742 aa		29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	FRAT1	Q92837	279 aa	Predicted RBP	29.3	■■■□□ 2.28
RHOT2-223	ENST00000569706	PHIP	Q8WWQ0	1821 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	PRMT2	P55345	433 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	GPAT2	Q6NUI2	795 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	TMEM57	Q8N5G2	664 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	SPATA5	Q8NB90	893 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	CLUAP1	Q96AJ1	413 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	NSUN4	Q96CB9	384 aa	Known RBP	29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	PTPRF	P10586	1907 aa		29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	COL2A1	P02458	1487 aa	Predicted RBP	29.29	■■■□□ 2.28
RHOT2-223	ENST00000569706	CTGF	P29279	349 aa		29.28	■■■□□ 2.28
RHOT2-223	ENST00000569706	ZKSCAN2	Q63HK3	967 aa		29.28	■■■□□ 2.28
RHOT2-223	ENST00000569706	NEUROD6	Q96NK8	337 aa		29.28	■■■□□ 2.28
RHOT2-223	ENST00000569706	GPR108	Q9NPR9	543 aa		29.28	■■■□□ 2.28
RHOT2-223	ENST00000569706	DOCK1	Q14185	1865 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	TBC1D12	O60347	775 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	PTPRA	P18433	802 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	KIF22	Q14807	665 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	PI16	Q6UXB8	463 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	NBPF11	Q86T75	865 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	SSH3	Q8TE77	659 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706	AFG3L2	Q9Y4W6	797 aa		29.27	■■■□□ 2.28
RHOT2-223	ENST00000569706		A0A0G2JLL6	359 aa	Predicted RBP	29.26	■■■□□ 2.27
RHOT2-223	ENST00000569706	G3BP1	Q13283	466 aa	Known RBP eCLIP	29.26	■■■□□ 2.27
RHOT2-223	ENST00000569706	SLC9C1	Q4G0N8	1177 aa		29.26	■■■□□ 2.27
RHOT2-223	ENST00000569706	PRRT2	Q7Z6L0	340 aa	Predicted RBP	29.26	■■■□□ 2.27
RHOT2-223	ENST00000569706	CTNND1	O60716	968 aa	Known RBP	29.25	■■■□□ 2.27
RHOT2-223	ENST00000569706	BCR	P11274	1271 aa		29.25	■■■□□ 2.27
RHOT2-223	ENST00000569706	EN2	P19622	333 aa	Predicted RBP	29.25	■■■□□ 2.27
RHOT2-223	ENST00000569706	MCAM	P43121	646 aa		29.25	■■■□□ 2.27
RHOT2-223	ENST00000569706	CPA4	Q9UI42	421 aa		29.25	■■■□□ 2.27
RHOT2-223	ENST00000569706	LDHC	P07864	332 aa		29.24	■■■□□ 2.27
RHOT2-223	ENST00000569706	UQCRFS1P1	P0C7P4	283 aa		29.24	■■■□□ 2.27
RHOT2-223	ENST00000569706	SLURP2	P0DP57	97 aa		29.24	■■■□□ 2.27
RHOT2-223	ENST00000569706	YTHDC1	Q96MU7	727 aa	Known RBP	29.24	■■■□□ 2.27
RHOT2-223	ENST00000569706	ZHX2	Q9Y6X8	837 aa		29.24	■■■□□ 2.27
RHOT2-223	ENST00000569706	GSTO1	P78417	241 aa		29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	ATP8B2	P98198	1209 aa		29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	TBC1D9	Q6ZT07	1266 aa		29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	TRIM47	Q96LD4	638 aa		29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	PICK1	Q9NRD5	415 aa		29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	SLC45A1	Q9Y2W3	748 aa		29.23	■■■□□ 2.27
RHOT2-223	ENST00000569706	FASTKD5	Q7L8L6	764 aa	Known RBP	29.22	■■■□□ 2.27
RHOT2-223	ENST00000569706	PARK7	Q99497	189 aa	Known RBP	29.22	■■■□□ 2.27
RHOT2-223	ENST00000569706	TMEM106C	Q9BVX2	250 aa		29.22	■■■□□ 2.27
RHOT2-223	ENST00000569706	SRRD	Q9UH36	339 aa		29.22	■■■□□ 2.27
RHOT2-223	ENST00000569706	PICALM	Q13492	652 aa		29.21	■■■□□ 2.27
RHOT2-223	ENST00000569706	GORAB	Q5T7V8	394 aa		29.21	■■■□□ 2.27
RHOT2-223	ENST00000569706	ZNF512B	Q96KM6	892 aa	Predicted RBP	29.21	■■■□□ 2.27
RHOT2-223	ENST00000569706	NOP58	Q9Y2X3	529 aa	Known RBP	29.21	■■■□□ 2.27
RHOT2-223	ENST00000569706	PSMC4	P43686	418 aa		29.2	■■■□□ 2.26
RHOT2-223	ENST00000569706	TNNI3K	Q59H18	835 aa		29.2	■■■□□ 2.26
RHOT2-223	ENST00000569706	FPGT-TNNI3K	V9GXZ4	949 aa		29.2	■■■□□ 2.26
RHOT2-223	ENST00000569706	MAST2	Q6P0Q8	1798 aa		29.19	■■■□□ 2.26
RHOT2-223	ENST00000569706	IGSF3	O75054	1194 aa		29.19	■■■□□ 2.26
RHOT2-223	ENST00000569706	SH3TC2	Q8TF17	1288 aa		29.19	■■■□□ 2.26
RHOT2-223	ENST00000569706	MGAM	O43451	1857 aa		29.19	■■■□□ 2.26
RHOT2-223	ENST00000569706	ZBTB7B	O15156	539 aa	Predicted RBP	29.18	■■■□□ 2.26
RHOT2-223	ENST00000569706	CYP2C8	P10632	490 aa		29.18	■■■□□ 2.26
RHOT2-223	ENST00000569706	OSBP	P22059	807 aa		29.18	■■■□□ 2.26
RHOT2-223	ENST00000569706	OSBPL5	Q9H0X9	879 aa	Predicted RBP	29.18	■■■□□ 2.26
RHOT2-223	ENST00000569706	HOXD10	P28358	340 aa		29.17	■■■□□ 2.26
RHOT2-223	ENST00000569706	DBNDD2	Q9BQY9	259 aa		29.17	■■■□□ 2.26
RHOT2-223	ENST00000569706	RAI14	Q9P0K7	980 aa		29.17	■■■□□ 2.26
RHOT2-223	ENST00000569706	SIPA1L1	O43166	1804 aa		29.16	■■■□□ 2.26
RHOT2-223	ENST00000569706	RLBP1	P12271	317 aa		29.16	■■■□□ 2.26
RHOT2-223	ENST00000569706	PPP4C	P60510	307 aa		29.15	■■■□□ 2.26
RHOT2-223	ENST00000569706	LRP2BP	Q9P2M1	347 aa		29.15	■■■□□ 2.26
RHOT2-223	ENST00000569706	LOC285556	D6RIA3	1793 aa		29.14	■■■□□ 2.26
RHOT2-223	ENST00000569706	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	29.14	■■■□□ 2.26
RHOT2-223	ENST00000569706	CDK5RAP2	Q96SN8	1893 aa		29.14	■■■□□ 2.26
RHOT2-223	ENST00000569706	FOCAD	Q5VW36	1801 aa		29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	ATAD5	Q96QE3	1844 aa		29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	MYO5A	Q9Y4I1	1855 aa	Known RBP	29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	CYP2E1	P05181	493 aa	Predicted RBP	29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	SLC4A8	Q2Y0W8	1093 aa		29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	TBC1D2	Q9BYX2	928 aa		29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	29.13	■■■□□ 2.25	4e-11	■■□□□ 11.8
RHOT2-223	ENST00000569706	AGTPBP1	Q9UPW5	1226 aa		29.13	■■■□□ 2.25
RHOT2-223	ENST00000569706	SURF6	O75683	361 aa	Known RBP	29.12	■■■□□ 2.25
RHOT2-223	ENST00000569706	FMNL1	O95466	1100 aa	Predicted RBP	29.12	■■■□□ 2.25
RHOT2-223	ENST00000569706	RRP1B	Q14684	758 aa	Known RBP	29.12	■■■□□ 2.25
RHOT2-223	ENST00000569706	CCDC158	Q5M9N0	1113 aa		29.12	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms