RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 MAGEB6Q8N7X4 407 aa13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 ZNF341Q9BYN7 854 aa13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 ZNF112Q9UJU3 913 aa13.47□□□□□ -0.25
SHCBP1-207ENST00000569702 OTOFQ9HC10 1997 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 HSPA8P11142 646 aaKnown RBP13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 GJA5P36382 358 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 TM4SF4P48230 202 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 VGLL4Q14135 290 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 GCC1Q96CN9 775 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 EDC3Q96F86 508 aaKnown RBP13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 WNK4Q96J92 1243 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 WRNIP1Q96S55 665 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 DNAJC2Q99543 621 aaKnown RBP13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 OSBPL5Q9H0X9 879 aaPredicted RBP13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 PAG1Q9NWQ8 432 aa13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
SHCBP1-207ENST00000569702 AK9Q5TCS8 1911 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 PDE6AP16499 860 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 SLC9C2Q5TAH2 1124 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 CERS3Q8IU89 383 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 ZKSCAN4Q969J2 545 aaPredicted RBP13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 OPTNQ96CV9 577 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 PRDM10Q9NQV6 1147 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 SAGE1Q9NXZ1 904 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 CSADQ9Y600 493 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 SNCAIPQ9Y6H5 919 aa13.45□□□□□ -0.26
SHCBP1-207ENST00000569702 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 PHF20L1A8MW92 1017 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 TBC1D12O60347 775 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 INPP5BP32019 993 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 LBX1P52954 281 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 INHBEP58166 350 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 DYNLL1P63167 89 aaKnown RBP13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 SMC5Q8IY18 1101 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 MIGA1Q8NAN2 632 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 GPATCH3Q96I76 525 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 RIOK1Q9BRS2 568 aaKnown RBP13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
SHCBP1-207ENST00000569702 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 LAMB1P07942 1786 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 TESPA1A2RU30 521 aaPredicted RBP13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 SPDYE5A6NIY4 337 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 IGHDP01880 384 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 ADD2P35612 726 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 NOL9Q5SY16 702 aaKnown RBP13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
SHCBP1-207ENST00000569702 FLT1P17948 1338 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 TRPA1O75762 1119 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 SLURP2P0DP57 97 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 METTL16Q86W50 562 aaKnown RBP13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 ERO1BQ86YB8 467 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 MAPKAPK5Q8IW41 473 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 PI4K2BQ8TCG2 481 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 DHX36Q9H2U1 1008 aaKnown RBP13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 CDK5RAP2Q96SN8 1893 aa13.42□□□□□ -0.26
SHCBP1-207ENST00000569702 FOCADQ5VW36 1801 aa13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 MAGEB6P1A0A0J9YX57 407 aa13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 PPATQ06203 517 aa13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 UBE3CQ15386 1083 aa13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 CFHR5Q9BXR6 569 aa13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 PI4KBQ9UBF8 816 aa13.41□□□□□ -0.26
SHCBP1-207ENST00000569702 IRF6O14896 467 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 ERC2O15083 957 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 CTNND1O60716 968 aaKnown RBP13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 GLRX3O76003 335 aaKnown RBP13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 MX1P20591 662 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 PPIL2Q13356 520 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 SLFNL1Q499Z3 407 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 KBTBD3Q8NAB2 608 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 PTPN18Q99952 460 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 PALD1Q9ULE6 856 aa13.4□□□□□ -0.26
SHCBP1-207ENST00000569702 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
SHCBP1-207ENST00000569702 IGF2BP3O00425 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms